Skip to content
View johndef64's full-sized avatar
12 followers · 20 following

Highlights

  • Pro

Block or report johndef64

Block user

Prevent this user from interacting with your repositories and sending you notifications. Learn more about blocking users.

You must be logged in to block users.

Maximum 250 characters. Please don’t include any personal information such as legal names or email addresses. Markdown is supported. This note will only be visible to you.
Report abuse

Contact GitHub support about this user’s behavior. Learn more about reporting abuse.

Report abuse
johndef64/README.md

Hi there 👋

johndef64

Languages and Tools:

Python R LaTeX

Matplotlib NumPy Pandas Plotly PyTorch scikit-learn SciPy

Anaconda PyCharm Visual Studio Code PyPi

Neo4J Arango DB MongoDB

Gimp Gnu Image Manipulation Program Krita

Pinned Loading

  1. KG-TransomicNet KG-TransomicNet Public

    Semantic-Quantitative property-graph framework integrating PheKnowLator KG with per-sample TCGA/TARGET multi-omics in ArangoDB.

    Python 1

  2. GRPM_system GRPM_system Public

    Computational Strategies in Nutrigenetics: Constructing a Reference Dataset of Nutrition-Associated Genetic Polymorphisms https://doi.org/10.1101/2023.08.04.23293659

    Jupyter Notebook 8

  3. nutrig-graphrag nutrig-graphrag Public

    Graph-based RAG system for biomedical nutrigenetic knowledge discovery. Enables natural language queries on gene-nutrient interactions, supports personalized nutrition counseling, and runs 100% loc…

    Jupyter Notebook 4

  4. grpm_bertopic grpm_bertopic Public

    paper: https://link.springer.com/chapter/10.1007/978-3-031-78093-6_1

    Jupyter Notebook 4

  5. grpm_missense grpm_missense Public

    The repository offers tools for GRPM Nutrigenomics analysis, focusing on missense variants. Includes R scripts, comprehensive annotations, and ProtVar access scripts.

    R 1

  6. myHGNN myHGNN Public

    Python