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  • Founder at Shaperk
  • Wiener Neustastd, Austria
  • 05:20 (UTC +02:00)

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istiyakamin/README.md

About Me

I'm Istiyak Amin Santo - a researcher and engineer working at the intersection of deep learning and biomedical imaging.

Currently completing my Master's by Research in AI at Multimedia University, Malaysia, I am pursuing a PhD focused on Advanced Deep Learning for Super-Resolution X-Nuclei MRI Reconstruction - a clinically significant challenge where AI can enable metabolic imaging of nuclei like ²³Na, ³¹P, and ³⁹K that standard MRI scanners struggle to resolve.

My background bridges research-grade AI (transformers, CNNs, XAI, medical imaging, computational pathology) with production engineering (full-stack, DevOps, blockchain). I am an IEEE-indexed author, a Gold Medalist at iNVENTEX Innovation Exhibition 2025, and a Three Minute Thesis Finalist at MMU.

Vision: Build clinically trustworthy AI systems that make non-proton MRI viable for early diagnosis of cancer, neurodegeneration, and metabolic disease.


PhD Research

Topic:  Advanced Deep Learning Methods for Super-Resolution
        Data Reconstruction for X-Nuclei (Non-Proton) MRI Imaging

X-Nuclei MRI (²³Na, ³¹P, ⁷Li, ³⁹K) reveals biochemical and metabolic information that proton MRI cannot - but suffers from inherently low SNR, sparse k-space data, and prohibitively long acquisition times. My PhD directly addresses these bottlenecks using deep learning.

Research Pillars

Area Methods
Super-Resolution Reconstruction CNN, Vision Transformer & Diffusion-based SR for 3D MRI volumes
Sparse K-Space Learning Deep unrolling, compressed sensing + neural networks
Physics-Informed Deep Learning Embedding MRI relaxometry & k-space priors into network design
Multi-Modal Fusion Using ¹H proton MRI as structural guidance for X-Nuclei enhancement
Uncertainty Quantification Bayesian networks & ensembles for clinical-grade reliability
Explainability (XAI) Grad-CAM++, SHAP, Integrated Gradients for model interpretability

Clinical Impact Areas

  • Oncology - Tumor metabolism mapping via ³¹P MRS
  • Neurology - Stroke penumbra & neurodegeneration via ²³Na MRI
  • Cardiology - Myocardial viability & tissue energetics
  • Psychiatry - Lithium (⁷Li) distribution monitoring in bipolar disorder

Publications

Journal Papers

Conference Papers (IEEE InCIT 2025, Scopus)


🏆 Awards & Recognition

Award Year
🥇 Gold Medal - iNVENTEX Innovation Exhibition (Biofuel LCA Toolkit) 2025
🎤 Finalist - Three Minute Thesis (3MT) Competition, MMU 2025
🎓 Fully Funded Government Linked University (GLU) Research Grant 2024–2025
📊 CGPA 4.0/4.0 - MSc by Research in Artificial Intelligence, MMU 2024–2025

Career Timeline

Role Organization Period
PhD Researcher (pursuing) Biomedical AI - X-Nuclei MRI Reconstruction 2026 →
Graduate Research Assistant Data Science Lab, Multimedia University, Malaysia Jul 2024 – Jun 2026
Full Stack Developer Royal Recruiter (Remote) Mar 2023 – May 2024
Blockchain Developer King Apps Studio, Malaysia Dec 2021 – Jul 2022
Web Developer Chief ERP System Sep 2017 – Nov 2021

Education

Degree Institution Result
MSc by Research - Artificial Intelligence Multimedia University, Malaysia -
BSc - Computer Science & Engineering Port City International University, Bangladesh CGPA 3.63/4.0
Diploma - Electronics Engineering Chittagong Polytechnic Institute CGPA 3.01/4.0

🤝 Open to Collaboration

I am actively looking to connect with:

  • Clinicians & Radiologists - seeking AI tools for MRI enhancement or pathology analysis
  • Medical Imaging Researchers - joint work on X-Nuclei MRI, histopathology AI, SR reconstruction
  • Healthtech Startups & VCs - building AI-powered diagnostic and imaging tools
  • PhD Programs & Labs - in computational pathology, medical image analysis, or biomedical AI

What I bring: Research rigor (IEEE publications, CGPA 4.0) + engineering depth (production systems, MLOps) + biomedical domain knowledge - a rare combination for a researcher at this stage.

Reach me: LinkedIn

Pinned Loading

  1. awesome-x-nuclei-super-resolution awesome-x-nuclei-super-resolution Public

    A curated, community-driven resource for super-resolution reconstruction in X-nuclei MRI (²³Na, ¹³C, ³¹P, ¹⁹F)

  2. oservo/aiFi oservo/aiFi Public template

    A Multi Layer Perceptron (MLP) Artificial Neural Network (ANN) Framework Developed in C for Machine Learning (ML) and Deep Learning (DL)

    C 11 5

  3. SumonMSelim/server-automation SumonMSelim/server-automation Public archive

    Collection of shell scripts to make your life easier as a developer or system administrator.

    Shell 70 33

  4. number2word number2word Public

    An simple package to convert numbers to words in Golang. e.g. one thousand twenty four

    Go 11