fix(deps): require napari>=0.5.5 for NumPy 2 compatibility - #37
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Old napari 0.4.x calls np.array(..., copy=False), which raises under NumPy 2 and breaks napari.Viewer() with a ValidationError. Pin the napari extra to >=0.5.5 (NumPy 2 + pydantic 2 compatible). Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
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view_in_napari()failed atnapari.Viewer()under NumPy 2:The env had napari 0.4.x (pydantic v1), which calls
np.array(..., copy=False)— NumPy 2 raises instead of copying. napari ≥ 0.5 is NumPy-2 / pydantic-2 compatible. Pin thenapariextra to>=0.5.5.Existing env:
pixi add --pypi "napari[all]>=0.5.5"and restart the kernel.🤖 Generated with Claude Code