Skip to content

feat: bundle common bioio readers in [bioio] extra - #11

Merged
lguerard merged 1 commit into
mainfrom
feat/bioio-readers
Jun 22, 2026
Merged

lguerard merged 1 commit into
mainfrom
feat/bioio-readers

Conversation

@lguerard

Copy link
Copy Markdown
Contributor

patchworks[bioio] now installs the common native readers automatically — bioio-nd2, bioio-ome-tiff, bioio-czi, bioio-tifffile, bioio-lif — alongside bioio-bioformats (Bio-Formats catch-all, JVM).

Note: requested bioio-ome-czi doesn't exist on PyPI; the CZI reader is bioio-czi (used here).

🤖 Generated with Claude Code

Install bioio-nd2, bioio-ome-tiff, bioio-czi, bioio-tifffile and
bioio-lif automatically with patchworks[bioio] (alongside the
bioio-bioformats catch-all), so the common microscopy formats work
out of the box without picking readers by hand.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
@lguerard
lguerard merged commit f661e72 into main Jun 22, 2026
1 check passed
@lguerard
lguerard deleted the feat/bioio-readers branch June 22, 2026 14:23
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

1 participant