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igorsdub/README.md

πŸ‘‹ Hi there

I'm Igor (pronounced Ee-gor), a curiosity-driven researcher passionate about the intersection of science and software development. Over the past 10 years, I've worked in experimental research, developed scientific software, and taught at schools and universities.

β€œLife is like a backflip. If you think too much, you land on your back.”

πŸš€ What I Do

At the Fyodor Kondrashov lab, I investigate how evolution discovers functional protein molecules. My daily work relies heavily on exploratory data analysis and statistical modeling. I support experimental design and help analyze high-throughput biological assays.

I believe research code should be reproducible, maintainable, and designed to last. Unfortunately, scientists are rarely taught how to write software, even though modern research depends on it. My goal is to help bridge that gap by introducing software development principles in academia through Good Enough Computing in Science.

πŸ’» Tech Stack

Python R MATLAB Bash Quarto

🌐 Socials

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  1. gecs gecs Public

    Good Enough Computing in Science teaches software development practices for science research projects.

    1

  2. quarto-website quarto-website Public template

    Quarto website published on GitHub Pages and deployed with GitHub Actions

    CSS

  3. comp-biophys-research-project comp-biophys-research-project Public template

    A descent project structure for making and sharing science work in Computational Biophysics.

    Python 2

  4. tmcleish/article-optimising-enm tmcleish/article-optimising-enm Public

    Processed data and scripts for a research article "Optimising Elastic Network Models for Protein Dynamics and Allostery: Spatial and Modal Cut-offs and Backbone Stiffness".

    Jupyter Notebook

  5. dynallo-scov2-mpro dynallo-scov2-mpro Public

    Data and code for Computational Analysis of Dynamic Allostery and Control in the SARS-CoV-2 Main Protease

    Python 1

  6. tmcleish/ddpt tmcleish/ddpt Public

    Durham Dynamic Protein Toolbox

    Fortran