Skip to content

Add USDA Phytochemical Database (enriched with ClinicalTrials + ChEMBL + patent data) - #73

Open
wirthal1990-tech wants to merge 3 commits into
hsiaoyi0504:masterfrom
wirthal1990-tech:master
Open

Add USDA Phytochemical Database (enriched with ClinicalTrials + ChEMBL + patent data)#73
wirthal1990-tech wants to merge 3 commits into
hsiaoyi0504:masterfrom
wirthal1990-tech:master

Conversation

@wirthal1990-tech

Copy link
Copy Markdown

This dataset restructures and enriches the USDA Dr. Duke's Phytochemical & Ethnobotanical Database into a flat, ML-ready format with 8 columns:

  • chemical, plant_species, application, dosage
  • pubmed_mentions_2026, clinical_trials_count_2026, chembl_bioactivity_count, patent_count_since_2020

Useful for virtual screening, lead prioritisation, and ethnopharmacology research. Free 400-row sample available (CC BY-NC 4.0), full dataset commercial.

Copilot AI review requested due to automatic review settings March 11, 2026 11:44

Copilot AI left a comment

Copy link
Copy Markdown

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Pull request overview

Adds a new database resource entry to the Awesome Cheminformatics list, highlighting an enriched USDA phytochemical dataset intended for ML-ready use cases.

Changes:

  • Add a new bullet under Libraries → Databases linking to “USDA Phytochemical Database — Enriched v2.0”.

💡 Add Copilot custom instructions for smarter, more guided reviews. Learn how to get started.

You can also share your feedback on Copilot code review. Take the survey.

Comment thread README.md Outdated
wirthal1990-tech and others added 2 commits March 11, 2026 13:12
Co-authored-by: Copilot <175728472+Copilot@users.noreply.github.com>
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

2 participants