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Update biodiversity.md - #1860

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nsjuty wants to merge 9 commits into
elixir-europe:masterfrom
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Update biodiversity.md#1860
nsjuty wants to merge 9 commits into
elixir-europe:masterfrom
nsjuty:patch-1

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@nsjuty

@nsjuty nsjuty commented Jul 24, 2026

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added biodiv-FC tool / usage which is being beta-tested

added biodiv-FC tool / usage which is being beta-tested
Comment thread pages/your_domain/biodiversity.md Outdated

@bianchini88 bianchini88 left a comment

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  • I would recommend moving this to the subsection below, which is explicitly about checklists and would be a better fit IMO.
  • FAIR checker should be added to the list of tools here. I can help with that. (DONE)
  • @nsjuty, you can consider adding yourself to the list of contributors. If you decide to do so, add your info here

Adding FAIR-checker to the table of tools
Comment thread pages/your_domain/biodiversity.md Outdated
Comment thread _data/tool_and_resource_list.yml Outdated
Comment on lines +3589 to +3594
- name: FAIR-checker
id: fair-checker
description: FAIR-Checker is a tool aimed at assessing FAIR principles and empowering data provider to enhance the quality of their digital resources.
registry:
biotools: FAIR-Checker
url: https://fair-checker.france-bioinformatique.fr/

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FAIR Checker is already present as a national tool, so does not need to be added as a duplicated to the tools and resources IMO

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@bedroesb I would say it is the other way around, and this tool should be in the general table. It is provided by France, but not limited to a French audience. (PS I am on holiday, so do not expect quick responses).

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I saw it was listed, but I don't know how to 'reference' an RDMkit 'tool' entry into the text that I wrote for this section. Help appreciated!

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@nsjuty Done already here f11f6f0

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@bianchini88 I am fine with it becoming a general tool, but that I would remove the one on the national page and list the tool as "This country contributes to"... We do not want duplications.

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@bedroesb agreed!

@nsjuty

nsjuty commented Jul 27, 2026

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  • I would recommend moving this to the subsection below, which is explicitly about checklists and would be a better fit IMO.

I think it fits in both to be honest - i looked at both options, but as a more general 'validation against schemas' tool, the upper section (where I put it) is a bit more general.. The subsection below would put it into one of the checklist secions, and its really not limited to a specific CL...the mapping across different checklists is what we will promote (so I think its higher up)
I'll let you decide - happy to move it..if I didn't convince you!

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..the mapping across different checklists is what we will promote (so I think its higher up)

I do not disagree with this, @nsjuty. However, ENA and its checklists are first introduced in the section below, so it feels a bit off to introduce these concepts in the context of FAIR Checker before mentioning them more generally. Optionally, one could also break down the FAIR Checker text into multiple bits: one more general about validation first and one about the actual usage of the checklist.

bedroesb and others added 2 commits July 28, 2026 09:26
Changing category for FAIR-checker, as it is a general service aimed at an international audience.
@korbinib

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I agree with @bianchini88 comments here. I think it would be better for the understandability of the text as a standalone to first introduce checklists before their validation.

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I suggest to restructure the sections about ENA checklists and the FAIRchecker.

Comment thread pages/national_resources/fr_resources.md Outdated
Co-authored-by: Korbinian Bösl <korbinian.bosl@uib.no>
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4 participants