docs: record round-4 (retire dead abstractions) in tracker - #249
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Summary
Docs-only follow-up to PR #248 (retire dead abstractions), which merged without its tracker updates.
REFACTOR_HARDENING.md: adds the round-4 section (removedQCPipeline/QCResult/QCStepProtocoland the unadoptedReferencePanelmodule;container/intentionally retained;ancestry/results.pyfound live) and marks remaining-work item Manhattan Plot #7 done.TESTING.md: suite count 397 → 374 (the 23 removed tests are the deleted QCPipeline/QCResult self-tests).Test plan
Targets
refactor/main, notmain.