refactor: Reinvent AtomTypeMix into IsotopeMix - #2221
Merged
trisyoungs merged 19 commits intoAug 15, 2025
Merged
Conversation
trisyoungs
force-pushed
the
dissolve2/refactor-atomtypemix
branch
from
August 13, 2025 15:26
d686afd to
0d69642
Compare
RobBuchananCompPhys
left a comment
Contributor
There was a problem hiding this comment.
Review in progress! Will try and get to the end after lunch.
RobBuchananCompPhys
approved these changes
Aug 15, 2025
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Follows #2219
This PR focuses on the
AtomTypeMixand associated classesAtomTypeDataandIsotopeDataand simplify / combining them into a single classIsotopeMixproviding all functionality.IsotopeMixstores a lot less data thanAtomTypeMixat the expense of having to calculate values when required, but since these values are not needed in hot loops IMO this is a reasonable compromise.I have tried to minimised impact in other classes, but
XRayWeightswarranted a partial refactor here. Also, the unit test associated toAtomTypeMixis removed as functionality ofIsotopeMixis well-covered in tests of theNeutronWeightsclass (the principal user ofIsotopeMix).