OLIGOSS is a package for de novo sequencing of linear oligomers from tandem mass spectrometry data.
Full documentation can be found here: https://croningroup.gitlab.io/origins/oligoss/index.html
Note: proper use of this package requires a good working knowledge of both the chemistry and analytical methods used to obtain results. It is not a magic bullet to solve all of your oligomer sequencing needs! Please ensure that all raw mass spectrometry data input to the package is of good quality. All results should be checked and validated wherever possible, especially if running data from a new instrument and / or oligomer class.
OLIGOSS is available through Pip (Python Package Index):
pip install oligoss --user
Source code can be viewedon github: https://github.com/croningp/oligoss.git
A tutorial for installing OLIGOSS and carrying out a basic sequencing run with an example data set can be found on Zenodo: https://zenodo.org/record/4252732