Multiomic State-Transitions Reveal Post-Treatment Transcriptome Desynchronization in Acute Myeloid Leukemia
Code repository accompanying the manuscript: https://doi.org/10.64898/2026.05.20.726707. This repository contains all code used for data processing, statistical analyses, mathematical modeling and figure generation presented in the manuscript.
All multiomic state-transition modeling, treatment vector analysis and figure generation (Main Figures 1 & 2).
Scripts for RNA-seq and miRNA-seq data processing, quality control, differential expression analysis, statistical modeling, and figure generation (Main Figures 3, 4, & 5).
** Public deposit in process. Accession number will be provided upon assignment. **
If you use this code or build upon this work, please cite: Multiomic State Transitions Reveal Post-Treatment Transcriptome Desynchronization in Acute Myeloid Leukemia (DOI: https://doi.org/10.64898/2026.05.20.726707)
- Jennifer Rangel Ambriz @jrangelambriz
- Ziang Chen @ziangC11