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ValueError: setting an array element with a sequence. The requested array has an inhomogeneous shape after 2 dimensions. The detected shape was (184526, 5) + inhomogeneo

Status: Open.

#9 In ciceklab/ECOLE;

· sicotteh opened on Apr 24, 2026

Running time almost not affected by data size or GPU

Status: Open.

#8 In ciceklab/ECOLE;

· zhxiaokang opened on Apr 15, 2026

single sample via ecole_call

Status: Open.

#7 In ciceklab/ECOLE;

· EshrakaAli opened on Nov 18, 2025

Runing and Fine-Tuning ecole on other diseases

Status: Open.

#6 In ciceklab/ECOLE;

· saifeldeen-bio opened on Aug 20, 2025

error in running "preprocess_sample.py"

Status: Open.

#5 In ciceklab/ECOLE;

· zincuum opened on Apr 3, 2025

IndexError : too many indices for array when run ecole_call.sh

Status: Open.

#4 In ciceklab/ECOLE;

· sonder-mei opened on Feb 10, 2025

Output folder empty after running the ecole_call.sh script

Status: Open.

#3 In ciceklab/ECOLE;

· saakshijalali opened on Aug 24, 2024

Error running call

Status: Open.

#2 In ciceklab/ECOLE;

· vschulz opened on Jun 28, 2024

Are Hg19 or other genome versions/species supported?

Status: Open.

#1 In ciceklab/ECOLE;

· vschulz opened on Jun 27, 2024