LAMP-LD

Install python version

pip install git+https://github.com/bogdanlab/lamp-ld.git#egg=pylampld

If you see errors, we recommend the following:

mamba install gcc_linux-64 g++_linux-64
pip install cmake

Install executable version

mkdir build && cd build
cmake .. -DBUILD_EXE=True
make

Example usage

lampld --pos pos.txt --admix admix.hap --ref EUR.hap AFR.hap EAS.hap --out out.txt

Contact

Kangcheng Hou (kangchenghou@gmail.com)