Plot

Plot identifications

Use the ANN-SoLo plotter to visualize spectrum–spectrum matches from your search results. The plotter can be run directly on the command line using ann_solo_plot or as a named Python module (if you do not have sufficient rights to install command-line scripts) using python -m ann_solo.plot_ssm.

The plotter requires as command-line arguments an mzTab identification file produced by ANN-SoLo and the identifier of the query to visualize. Please note that the spectral library used to perform the search needs to be present in the exact location as specified in the mzTab file.

The plotter will create a PNG file with a mirror plot to visualize the specified spectrum–spectrum match.