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@biosustain

DTU Biosustain

The Novo Nordisk Foundation Center for Biosustainability

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  1. guidelines guidelines Public

    Guidelines for employees and collaborators at BRIGHT, with the goal of educating readers and minimizing the likelihood of issues arising with our computational platforms.

    4

  2. potion potion Public archive

    Flask-Potion is a RESTful API framework for Flask and SQLAlchemy, Peewee or MongoEngine

    Python 487 49

  3. cameo cameo Public

    cameo - computer aided metabolic engineering & optimization

    Python 129 44

  4. shu shu Public

    Multi-dimensional, trans-omics metabolic maps.

    Rust 56 1

  5. croissance croissance Public

    Tool for estimating growth rates from microbial growth curves

    Python 32 12

  6. Maud Maud Public

    Enzyme models that take into account kinetics, allostery and thermodynamics

    Python 29 2

Repositories

Showing 10 of 172 repositories
  • biosustain/tracy-visualisations's past year of commit activity
    Python 0 GPL-3.0 0 0 0 Updated Sep 9, 2026
  • growthcurves Public

    Calculate the most relevant growth curve parameters with different methods (models, sliding window, etc.)

    biosustain/growthcurves's past year of commit activity
    Jupyter Notebook 8 GPL-3.0 2 11 3 Updated Sep 9, 2026
  • pankb Public

    The Pangenome Knowledge Base (PanKB) serves as an up-to-date resource for pangenomics research methods and the dissemination of results and currently offers basic pangenome characteristics and advanced pangenome analytics for 8 major biotech bacteria families.

    biosustain/pankb's past year of commit activity
    HTML 7 MIT 1 0 0 Updated Sep 9, 2026
  • dsp_course_metabolomics_intro Public

    About Introduction to massspectrometry-based metabolomics (raw data processsing and downstream analysis).

    biosustain/dsp_course_metabolomics_intro's past year of commit activity
    Jupyter Notebook 1 1 8 1 Updated Sep 8, 2026
  • bigg_models Public
    biosustain/bigg_models's past year of commit activity
    CSS 0 MIT 0 0 0 Updated Sep 8, 2026
  • dsp_notes Public

    Public notes and hints of the Data Science Platform.

    biosustain/dsp_notes's past year of commit activity
    Python 1 1 2 6 Updated Sep 4, 2026
  • bigg Public
    biosustain/bigg's past year of commit activity
    Python 1 MIT 0 0 0 Updated Sep 4, 2026
  • dsp_bulk-sangerseq Public

    Prototype tool for the bulk analysis and visualisation of Sanger sequencing data

    biosustain/dsp_bulk-sangerseq's past year of commit activity
    HTML 1 GPL-3.0 0 9 3 Updated Sep 3, 2026
  • cobradb Public
    biosustain/cobradb's past year of commit activity
    Python 1 MIT 0 2 0 Updated Aug 31, 2026
  • pankb_mcp Public

    MCP-based microservice for PanKB with FastMCP server, AI client, and Streamlit integration.

    biosustain/pankb_mcp's past year of commit activity
    Python 0 MIT 1 0 0 Updated Aug 30, 2026