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build(deps): bump the pip-dependencies group in /docker with 5 updates #3093

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Merged
jiayuasu merged 2 commits into from
Jul 12, 2026
+11 −6
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build(deps): bump the pip-dependencies group in /docker with 5 updates #3093

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ec7604b
build(deps): bump the pip-dependencies group in /docker with 5 updates
dependabot[bot] Jul 1, 2026
0ade482
Move numpy to 2.x and fix the Debian-numpy uninstall failure
jiayuasu Jul 12, 2026
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10 changes: 5 additions & 5 deletions docker/requirements.txt
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Original file line number Diff line number Diff line change
@@ -1,16 +1,16 @@
attrs
descartes
fiona==1.10.1
geopandas==1.1.2
geopandas==1.1.3
ipykernel
ipywidgets
jupyterlab==4.5.9
jupyterlab==4.6.0
jupyterlab-widgets==3.0.16
keplergl==0.3.7
matplotlib
numpy==1.26.4
numpy==2.2.6
pandas==2.3.3
py4j==0.10.9.9
pydeck==0.9.1
rasterio==1.4.4
pydeck==0.9.2
rasterio==1.5.0
shapely==2.1.2
7 changes: 6 additions & 1 deletion docker/sedona-docker.dockerfile
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Expand Up @@ -49,8 +49,13 @@ RUN chmod +x ${SEDONA_HOME}/docker/install-spark.sh
RUN ${SEDONA_HOME}/docker/install-spark.sh ${spark_version} ${hadoop_s3_version} ${aws_sdk_version}

# Install Python dependencies
# --ignore-installed is required because install-spark.sh installs GDAL
# (gdal-bin/libgdal-dev), which pulls in Debian's python3-numpy. Upgrading numpy
# then fails with "Cannot uninstall numpy ... RECORD file not found" because pip
# cannot remove a distro-managed package. --ignore-installed skips that uninstall
# and installs into /usr/local, which precedes dist-packages on sys.path.
COPY docker/requirements.txt /opt/requirements.txt
RUN pip3 install --no-cache-dir -r /opt/requirements.txt --break-system-packages
RUN pip3 install --no-cache-dir -r /opt/requirements.txt --break-system-packages --ignore-installed


# Copy local compiled jars and python code to the docker environment
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