Skip to content

AttributeError: 'NoneType' object has no attribute 'strip' #6

Description

@Ambreen06

I am at the first step and used the following command:
python run_preProcess_by_chr_step1.py -i /media/ambreen/D206B4E906B4CFA9/Mouse/TG_TS_RNA/alignment/123 -o /media/ambreen/D206B4E906B4CFA9/Mouse/TG_TS_RNA/alignment/ --nice
But it is giving me following error:
Traceback (most recent call last):
File "run_preProcess_by_chr_step1.py", line 227, in
if name == "main": main()
File "run_preProcess_by_chr_step1.py", line 178, in main
cmd += "%s " % preProcess_options.strip()
AttributeError: 'NoneType' object has no attribute 'strip'

the txt file i am loading is attached.
123.txt

what is wrong with file?

Activity

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Projects

    No projects

      Milestone

      No milestone

      Relationships

      None yet

      Development

      No branches or pull requests

      Issue actions