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Taking a step towards building my future
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Taking a step towards building my future
28 followers · 47 following

Achievements

Achievement: Pair Extraordinairex3Achievement: StarstruckAchievement: QuickdrawAchievement: YOLOAchievement: Arctic Code Vault ContributorAchievement: Pull Sharkx3

Achievements

Achievement: Pair Extraordinairex3Achievement: StarstruckAchievement: QuickdrawAchievement: YOLOAchievement: Arctic Code Vault ContributorAchievement: Pull Sharkx3

Highlights

  • Pro

Organizations

@FAIRplus @Fraunhofer-ITMP

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YojanaGadiya/README.md

Hi there, I am Yojana Gadiya 👋

Profile Hits

  • 🔭 I’m currently working as a data scientist at @Enveda
  • 😄 Pronouns: She/her
  • 💻 Currently focusing on data aggregation and ETL pipelines for metabolomics data for drug discovery and development
  • 🌱 I love developing Python packages for community use. My works include
    • PEMT - a pharmaceutical patent mining tool
    • pyBiodatafuse - a modular query biomedical data ingestion pipeline
  • 💬 Ask me about: FAIR, Knowledge graphs, Patent mining, Chemoinformatics
  • 📫 How to reach me: LinkedIn, Google Scholar
  • 🤓 I was also a Chemoinformatics FAIR Data Champion at FAIRsharing.org

Expertise preview

Yojana's github stats

GraphQL git Neo4J MySQL AWS
LaTeX Markdown Python Matplotlib
Pandas Plotly scikit-learn SciPy CodeCov
Docker Selenium GitHub GitLab

Pinned Loading

  1. Fraunhofer-ITMP/PEMT Fraunhofer-ITMP/PEMT Public

    Source code and data files for "PEMT: A patent enrichment tool with applicability in drug discovery"

    Python 17 5

  2. enveda/kgem-ensembles-in-drug-discovery enveda/kgem-ensembles-in-drug-discovery Public

    Source code and data repository for "Ensembles of knowledge graph embedding models improve predictions for drug discovery"

    Jupyter Notebook 20 4

  3. Fraunhofer-ITMP/Pharmaceutical-patent-landscaping Fraunhofer-ITMP/Pharmaceutical-patent-landscaping Public

    Source code and data files for manuscript titled "Pharmaceutical patent landscaping: A novel approach to understand patents from the drug discovery perspective"

    Jupyter Notebook 15 3

  4. enveda/ethnobotany enveda/ethnobotany Public

    Source code and data for "Modern drug discovery using ethnobotany: A large-scale cross-cultural analysis of traditional medicine reveals common therapeutic uses"

    Jupyter Notebook 5 3

  5. Fraunhofer-ITMP/E3_binder_Model Fraunhofer-ITMP/E3_binder_Model Public

    Source code and dataset for paper titled "Pharmacophore-based ML model to predict ligand selectivity for E3 ligase binders"

    R 2

  6. IMI-COMBINE/broad_spectrum_prediction IMI-COMBINE/broad_spectrum_prediction Public

    Source code and data repository for broad spectrum antibacterial compounds

    HTML 2 3