Feature/prostt5 foldseek detection - #69

Merged

Vini2 merged 12 commits into

Vini2:developfrom

gbouras13:feature/prostt5-foldseek-detection

Aug 24, 2026

Commits on Aug 13, 2026

Finish gracefully when no genomes are resolved (coverm zero-alignment panic)
gbouras13
committed
da57ff2
prostt5-rocm: bump torch pin to 2.9.1
gbouras13
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fe8b513
Replace per-rule container flags with one monolithic Setonix image
gbouras13
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7ea3159
container: fix two real build failures in env pre-build
gbouras13
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b2781ba
Reuse the base image's ROCm torch instead of installing a second one
gbouras13
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f3a717e
container: report the base torch build flavour, do not assert on it
gbouras13
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74b2038

Commits on Aug 14, 2026

container: --gpu-backend system must be passed, not baked into config
gbouras13
committed
4e8ed95

Commits on Aug 17, 2026

Commits on Aug 18, 2026

Fix --mfd-workers crashing on real data: oriented_links was unpicklable
gbouras13
committed
cd7ad30

Commits on Aug 20, 2026

Fix --mfd-workers on large assemblies: inherit inputs by fork, don't pickle
gbouras13
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277178d