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General improvements - #6

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jonasfreimuth merged 8 commits into
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general-improvements
Dec 14, 2025
Merged

General improvements#6
jonasfreimuth merged 8 commits into
masterfrom
general-improvements

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@jonasfreimuth

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  • Add test dir to formatted dirs.
  • Add .vscode dir to ignored files.
  • Testing improvements
    • Using separate temprary output dirs.
    • Failing faster.
    • Turned global var to fixture.
    • Factored fixtures into conftest.py.

Else test fails might not be discovered when they happen, or at all.
So partial genotyping does not depend on previous whole allele
output.
Ensures tests are independent & more reproducible.
More idiomatic, also clearer.
Where they should live for other tests to use them.
@jonasfreimuth
jonasfreimuth merged commit 1b382a4 into master Dec 14, 2025
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@jonasfreimuth
jonasfreimuth deleted the general-improvements branch December 14, 2025 21:09
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