The "poreture" package implements centerline extraction and skeletonization methods.
TL Kline, M Zamir, EL Ritman, "Accuracy of microvascular measurements obtained from micro-CT images," Annals of biomedical engineering 38 (9), 2851-2864, 2010.
TL Kline, EL Ritman, "Characterization of the pore labyrinth geometry of sea sponges imaged by micro-CT," Journal of Porous Materials 19 (2), 141-151, 2012.
- Timothy Lee Kline
- Timothy Lee Kline
- Adrian Hecker
The required dependencies to build the software are:
- python
- numpy
- scipy
- skfmm
- nibabel
This packages uses distutils, which is the default way of installing python modules. To install in your home directory, use:
python setup.py install --home
To install for all users on Unix/Linux:
python setup.py build
sudo python setup.py install
Follow: Fork + Pull Model:
https://help.github.com/articles/using-pull-requests