refactor: rearchitect assignCompartments as place -> repair -> certify - #688

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edkerk wants to merge 6 commits into

feat/assigncompartments-certify

Commits on Jul 17, 2026

refactor: rearchitect assignCompartments as place -> repair -> certify
edkerk
committed
648b43f
refactor: handle merged multi-compartment input and follow the score at genome scale
edkerk
committed
62ae554
refactor: make assignCompartments a faithful port of the raven-toolbox method
edkerk
committed
fe381e7

Commits on Jul 18, 2026