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Restructure the sidebar from a loose collection of worked examples into eight coherent sections reflecting the pedagogical arc of the course: Getting Started, Introduction to LMMs, Model Specification, Contrast Coding & Transformations, Inference, GLMMs, Visualization & Diagnostics, and Extended Worked Examples. - Move all 23 .qmd files into subfolders matching their section - Update _quarto.yml render list and sidebar paths accordingly - Remove draft selection.qmd from the render list (no title, eval: false) - Add about.qmd to the Getting Started sidebar (was rendered but unreachable) - Rename several documents to make their topic clear rather than citing the source paper (e.g. "RePsychLing Kliegl et al. (2011)" → "Visual Attention Effects: Kliegl et al. (2011)") - Add "See Also" crosslinks between related documents (sleepstudy ↔ singularity, fggk21 ↔ contrasts/AoGPlots, kwdyz11 ↔ kkl15/contrasts, bootstrap ↔ profiling/kb07, kb07 ↔ shrinkageplot) - Update all inter-document links to reflect new relative paths - Add DATADIR const to SMLP2026 package (exported) and replace all "./data/..." string literals in Julia code blocks with joinpath(DATADIR, "..."); add `using SMLP2026` where missing Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
Mirrors the earlier DATADIR change: all "./fits/..." path strings in Julia code (and inline Julia prose examples) are replaced with joinpath(FITSDIR, ...). FITSDIR is added to the SMLP2026: selective imports in the two affected files. Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
Document basic quarto preview and quarto render workflows at the command line, including single-file usage, and describe the equivalent VS Code Quarto extension commands and keyboard shortcuts. Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
…the Arrow example
- Relocate power_simulation.qmd to inference/ and wire it into the render list and the Inference sidebar section - Drop its per-page css/embed-resources override so it inherits the global theme like the sibling pages (the relative css path broke under inference/) - Remove selection.qmd, a non-rendering scratch stub - Drop Project.toml~ / Manifest-v1.13.toml~ backup files - Add the power_simulation model fit cache Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
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Summary
.qmdfiles into subfolders matching their section; update all paths in_quarto.ymland inter-document crosslinks accordingly.about.qmdto the sidebar (was rendered but unreachable via navigation) and remove draftselection.qmdfrom the render list (no title,eval: falsethroughout)."./data/..."and"./fits/..."string literals in Julia code withjoinpath(DATADIR, ...)andjoinpath(FITSDIR, ...)respectively; addDATADIRandFITSDIRto theSMLP2026package (exported) and tousing SMLP2026:imports in affected files.index.qmd:quarto preview/quarto renderat the command line and the equivalent VS Code extension commands.Test plan
quarto renderfrom repo root completes without errorsDATADIRandFITSDIRresolve to correct absolute paths at runtime🤖 Generated with Claude Code