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  • Preprint release proteingym-base and -benchmark

    Goal: Reach a state where the value of the software to the community is apparent without direct interaction. This includes downloadable datasets and models, and nicely presented preliminary benchmarking results. Models: - 5 supervised - 5 zeroshot Datasets: - Data repository with at least the datasets from pg 1: https://huggingface.co/datasets/ProteinGym/ProteinGym2.0 Web Catalogue - Updated with a small subset of the benchmark - Optional: Improve UI

    No due date
    •0/3 issues closed
    0% complete3 open0 closed

  • Public release package

    **Summary** Publicly release the package: - Make Github repo public - Publish package on PyPi **Approvals** Requires approval from IFF (Henning) and the Harvard ProteinGym team. **User acceptance tests** Package can be installed from: - Github - PyPi (through pip)

    Overdue by 10 month(s)
    •
    Due by October 23, 2025
    •83/91 issues closed
    91% complete8 open83 closed