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Split FSStats into two files#5

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mattcieslak merged 3 commits into
mainfrom
seg-atlas
Jun 12, 2025
Merged

Split FSStats into two files#5
mattcieslak merged 3 commits into
mainfrom
seg-atlas

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@tsalo

@tsalo tsalo commented Jun 12, 2025

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The files are a long-form one containing volumetric summary measures and a wide-form one containing Freesurfer QC/whole-brain measures.

@tsalo
tsalo requested a review from mattcieslak June 12, 2025 15:58
Comment thread freesurfer_post/interfaces/tabular.py
Comment thread freesurfer_post/interfaces/tabular.py

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Thank you!

Comment thread freesurfer_post/interfaces/tabular.py
out_json = output_dir / f'{output_prefix}_brainmeasures.json'
atlas_tsv = output_dir / f'{output_prefix}_seg-Freesurfer_morph.tsv'
whole_brain_tsv = output_dir / f'{output_prefix}_desc-Freesurfer_qc.tsv'
atlas_json = output_dir / f'{output_prefix}_seg-Freesurfer_morph.json'

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MUCH better suffix! Good idea

Comment thread freesurfer_post/interfaces/tabular.py
@mattcieslak
mattcieslak merged commit 5bd4799 into main Jun 12, 2025
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2 participants