Register strict phyloP VEP control cells - #536
Open
gonzalobenegas wants to merge 7 commits into
Open
Conversation
gonzalobenegas
marked this pull request as ready for review
August 28, 2026 12:32
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Register the six terminal step-4,999 checkpoints from issue #517's strict phyloP selector control in
evals_v2.The experiment config evaluates development
trainsplits only: Mendelian Traits and Complex Traits for all six arms, plus SGE for CDS.The focused workflow-config suite passes all 9 tests.
The dry-run resolves the four completed arms to 22 jobs: 4 checkpoint downloads, 9 scoring cells, and 9 metric cells.
It includes no held-out cells or intermediate checkpoints.
Part of #517