Add body envelope multi table - #42

Merged

Can-Zhao merged 12 commits into

NVIDIA-Medtech:mainfrom

Can-Zhao:add-body-envelope-multi-table

Jul 20, 2026

Commits on Jul 19, 2026

add_body_envelope: add step-8 table detection to remove the CT table

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0086654
add_body_envelope: rename body_hu -> air_hu (it's the air mask, CT < hu_threshold)

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b17113c
add_body_envelope: address review — np.asarray wrap (consistent w/ steps 1&4) + log when table safety net fires

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6904008
ruff format

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3f85f69

Commits on Jul 20, 2026

Merge branch 'NVIDIA-Medtech:main' into main
Can-Zhao
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b7d27d3
add_body_envelope: remove ALL table-sized air-in-body components in step-8

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18b645f
add_body_envelope: document lung-segmentation requirement

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4c1a9ec
add_body_envelope: add seg_has_lung flag to gate step-8 table removal

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828dd07
add_body_envelope: drop redundant .. important:: note (covered by seg_has_lung arg doc)

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e3948a6
add_body_envelope: gate whole step-8 on seg_has_lung; move scipy.ndimage import to top

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53cb3b7
add_body_envelope: simplify seg_has_lung docstring wording

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bac2948
ruff format: collapse a pre-split log string in infer_image_from_mask.py (line fits in 150)

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15532ab