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Read write anndata using anndataR

Status: Open.

#144 In MangiolaLaboratory/cellNexus;

· myushen opened on Aug 5, 2026

Parallel download of cache files

Status: Open.

#143 In MangiolaLaboratory/cellNexus;

· gaoyingnan-academic opened on Aug 3, 2026

Unexpected NaN values in SCT assays

Status: Open.

#142 In MangiolaLaboratory/cellNexus;

· gaoyingnan-academic opened on Jul 30, 2026

expression sanity check

Status: Open.

#139 In MangiolaLaboratory/cellNexus;

· myushen opened on Jul 27, 2026

avoid file corruption due to half-downloaded file

Status: Open.

#134 In MangiolaLaboratory/cellNexus;

· stemangiola opened on Jul 23, 2026

check that cellNexus.parallel_downloads option is documented

Status: Open.

#133 In MangiolaLaboratory/cellNexus;

· stemangiola opened on Jul 23, 2026

drop tissue_groups column in the metadata

Status: Open.

#131 In MangiolaLaboratory/cellNexus;

· myushen opened on Jul 20, 2026

check is DUCKDB multithread is convenient

Status: Open.

#127 In MangiolaLaboratory/cellNexus;

· stemangiola opened on Jul 17, 2026

Duplicated file id

Status: Open.

#116 In MangiolaLaboratory/cellNexus;

· stemangiola opened on Jun 3, 2026

Pseudobulk error with excessive number of reads and conflicting rownames.

Status: Open.

#105 In MangiolaLaboratory/cellNexus;

· gaoyingnan-academic opened on Apr 24, 2026

get_metacell and get_pseudobulk return warnings instead of errors

Status: Open.

#67 In MangiolaLaboratory/cellNexus;

· myushen opened on Nov 3, 2025

implement "left_join" version of the parquet to reduce size

Status: Open.

#56 In MangiolaLaboratory/cellNexus;

· stemangiola opened on Aug 29, 2025