fix ribosome identification in alive module - #103
Merged
Annotations
10 errors and 5 warnings
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[Workflow Telemetry] AxiosError
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Post Run neurogenomics/rworkflows@master
AxiosError: Request failed with status code 403
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[Workflow Telemetry] AxiosError
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[Workflow Telemetry] getStackedAreaGraph {"options":{"width":1000,"height":500,"xAxis":{"label":"Time"},"yAxis":{"label":"Memory Usage (MB)"},"timeTicks":{"unit":"auto"}},"areas":[{"label":"Used","color":"#377eb899","points":[{"x":1784772171999,"y":2971.921875},{"x":1784772176998,"y":2947.59375},{"x":1784772181997,"y":2889.359375},{"x":1784772186996,"y":2923.5},{"x":1784772191997,"y":2897.90625},{"x":1784772196998,"y":2711.078125},{"x":1784772201997,"y":2815.21875},{"x":1784772206997,"y":2906.15625},{"x":1784772212000,"y":2899.0625},{"x":1784772216997,"y":2867.6875},{"x":1784772221997,"y":2807.65625},{"x":1784772226996,"y":1681.484375},{"x":1784772231997,"y":1980.125},{"x":1784772236997,"y":1948.4375},{"x":1784772241997,"y":2126.171875},{"x":1784772246997,"y":2142.234375},{"x":1784772251998,"y":2139.515625},{"x":1784772256999,"y":2332.359375},{"x":1784772261997,"y":2504.921875},{"x":1784772266996,"y":2509.5},{"x":1784772271997,"y":2507.671875},{"x":1784772276997,"y":2520.8125},{"x":1784772281997,"y":2513.21875},{"x":1784772286997,"y":2503.8125},{"x":1784772291997,"y":2501.921875},{"x":1784772296996,"y":1516.109375},{"x":1784772301999,"y":1639.890625},{"x":1784772306997,"y":1831.03125},{"x":1784772311997,"y":1876.84375},{"x":1784772316997,"y":1907.375},{"x":1784772321998,"y":1934.53125},{"x":1784772326998,"y":2000.078125},{"x":1784772332000,"y":2037.34375},{"x":1784772336998,"y":2102.9375},{"x":1784772341998,"y":2300.796875},{"x":1784772347000,"y":2299.515625},{"x":1784772351998,"y":2301.75},{"x":1784772356998,"y":2297.703125},{"x":1784772361998,"y":2300.046875},{"x":1784772366997,"y":2336.765625},{"x":1784772371998,"y":2399.609375},{"x":1784772376997,"y":1993.09375},{"x":1784772381999,"y":2029.078125},{"x":1784772386997,"y":2057.6875},{"x":1784772391998,"y":2060.0625},{"x":1784772396998,"y":2175.046875},{"x":1784772402001,"y":2174.015625},{"x":1784772406999,"y":2189.78125},{"x":1784772411997,"y":1898.90625},{"x":1784772416998,"y":2173.546875},{"x":1784772421999,"y":2371.671875},{"x":1784772426998,"y":2365.59375},{"x":1784772431998,"y":2588.234375},{"x":1784772436999,"y":2781.78125},{"x":1784772441998,"y":2795.65625},{"x":1784772446998,"y":2845.1875},{"x":1784772451997,"y":2800.484375},{"x":1784772456999,"y":2842.4375},{"x":1784772462001,"y":2825.234375},{"x":1784772466996,"y":2781.3125},{"x":1784772471998,"y":2558.15625},{"x":1784772476997,"y":2760.203125},{"x":1784772481998,"y":2823.8125},{"x":1784772486997,"y":2811.0625},{"x":1784772491997,"y":2547.90625},{"x":1784772496999,"y":2667.171875},{"x":1784772501999,"y":2697.828125},{"x":1784772506997,"y":2730.859375},{"x":1784772511998,"y":2697.1875},{"x":1784772516997,"y":2746.421875},{"x":1784772521998,"y":2773.90625},{"x":1784772526999,"y":2494.25},{"x":1784772532002,"y":2812.828125},{"x":1784772536997,"y":2556.171875},{"x":1784772541996,"y":2770.328125},{"x":1784772546997,"y":2786.140625},{"x":1784772551998,"y":2573.609375},{"x":1784772556998,"y":2533.140625},{"x":1784772561998,"y":2513.875},{"x":1784772566997,"y":2564.40625},{"x":1784772571998,"y":2572.109375},{"x":1784772576997,"y":2651.90625},{"x":1784772581997,"y":2693.921875},{"x":1784772586998,"y":2775.53125},{"x":1784772591996,"y":2605.40625},{"x":1784772596999,"y":2499.65625},{"x":1784772601996,"y":2563.828125},{"x":1784772606998,"y":2275.078125},{"x":1784772611997,"y":2646.46875},{"x":1784772616998,"y":2767.25},{"x":1784772621997,"y":2071.984375},{"x":1784772626999,"y":2465.796875},{"x":1784772631998,"y":2137.21875},{"x":1784772637001,"y":2508.0625},{"x":1784772641998,"y":2735.484375},{"x":1784772647002,"y":2139.65625},{"x":1784772651998,"y":2596.015625},{"x":1784772656997,"y":2690.859375},{"x":1784772661998,"y":2676.078125},{"x":1784772666997,"y":2663.015625},{"x":1784772671998,"y":2313.84375},{"x":1784772676997,"y":2677.0625},{"x":1784772681999,"y":2195.375},{"x":1784772686998,"y":2536.203125},{"x":1784772692002,"y":2009.546875},{"x":1784772696999,"y":2351.75},{"x":1784772702001,"y":2661.78125},{"x":1784772706997,"y":2398.140625},{"x":1784772711998,"y":2646.828125},{"x":1784772716996,"y":2363.078125},{"x":1784
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[Workflow Telemetry] AxiosError
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[Workflow Telemetry] getStackedAreaGraph {"options":{"width":1000,"height":500,"xAxis":{"label":"Time"},"yAxis":{"label":"CPU Load (%)"},"timeTicks":{"unit":"auto"}},"areas":[{"label":"User Load","color":"#e41a1c99","points":[{"x":1784772171999,"y":36.50038405735256},{"x":1784772176998,"y":40.12096774193548},{"x":1784772181997,"y":34.9269588313413},{"x":1784772186996,"y":41.37466307277628},{"x":1784772191997,"y":47.17232202262142},{"x":1784772196998,"y":42.15817694369973},{"x":1784772201997,"y":37.42494996664443},{"x":1784772206997,"y":47.290969899665555},{"x":1784772212000,"y":40.61456245824983},{"x":1784772216997,"y":16.765676567656765},{"x":1784772221997,"y":41.27198917456021},{"x":1784772226996,"y":24.564926372155288},{"x":1784772231997,"y":41.4},{"x":1784772236997,"y":29.49061662198391},{"x":1784772241997,"y":26.48037258815702},{"x":1784772246997,"y":43.733333333333334},{"x":1784772251998,"y":34.630872483221474},{"x":1784772256999,"y":30.263157894736842},{"x":1784772261997,"y":17.562724014336915},{"x":1784772266996,"y":14.371657754010695},{"x":1784772271997,"y":13.31103678929766},{"x":1784772276997,"y":13.989290495314592},{"x":1784772281997,"y":19.919786096256683},{"x":1784772286997,"y":17.022696929238982},{"x":1784772291997,"y":18.670248488918737},{"x":1784772296996,"y":14.457831325301203},{"x":1784772301999,"y":18.114973262032088},{"x":1784772306997,"y":26.551034022681787},{"x":1784772311997,"y":12.533692722371967},{"x":1784772316997,"y":11.618535930154467},{"x":1784772321998,"y":12.096774193548388},{"x":1784772326998,"y":17.568470273881097},{"x":1784772332000,"y":9.562289562289562},{"x":1784772336998,"y":8.724832214765101},{"x":1784772341998,"y":13.002680965147453},{"x":1784772347000,"y":9.206989247311828},{"x":1784772351998,"y":9.785522788203753},{"x":1784772356998,"y":10.75268817204301},{"x":1784772361998,"y":14.573539288112828},{"x":1784772366997,"y":27.114093959731544},{"x":1784772371998,"y":16.856950973807923},{"x":1784772376997,"y":9.899665551839465},{"x":1784772381999,"y":9.066487575554063},{"x":1784772386997,"y":8.529214237743451},{"x":1784772391998,"y":10.289172831203766},{"x":1784772396998,"y":10.685483870967742},{"x":1784772402001,"y":7.046979865771812},{"x":1784772406999,"y":14.132618888144673},{"x":1784772411997,"y":22.74247491638796},{"x":1784772416998,"y":41.95056780227121},{"x":1784772421999,"y":43.591455273698266},{"x":1784772426998,"y":19.393939393939394},{"x":1784772431998,"y":40.400000000000006},{"x":1784772436999,"y":52.901934623082056},{"x":1784772441998,"y":38.26086956521739},{"x":1784772446998,"y":44.62975316877918},{"x":1784772451997,"y":31.53692614770459},{"x":1784772456999,"y":33.713901947615845},{"x":1784772462001,"y":27.55852842809365},{"x":1784772466996,"y":48.598130841121495},{"x":1784772471998,"y":64.64309539693129},{"x":1784772476997,"y":84.07728181212525},{"x":1784772481998,"y":53.707414829659314},{"x":1784772486997,"y":39.786381842456606},{"x":1784772491997,"y":49.030100334448164},{"x":1784772496999,"y":58.80794701986755},{"x":1784772501999,"y":50.604026845637584},{"x":1784772506997,"y":72.90969899665552},{"x":1784772511998,"y":75.46666666666667},{"x":1784772516997,"y":82.6},{"x":1784772521998,"y":58.172114743162105},{"x":1784772526999,"y":38.69246164109406},{"x":1784772532002,"y":68.0694722778891},{"x":1784772536997,"y":50.36740146960588},{"x":1784772541996,"y":55.72569906790945},{"x":1784772546997,"y":58.099062918340024},{"x":1784772551998,"y":52.09580838323353},{"x":1784772556998,"y":45.12683578104139},{"x":1784772561998,"y":26.63115845539281},{"x":1784772566997,"y":24.089068825910932},{"x":1784772571998,"y":23.49397590361446},{"x":1784772576997,"y":53.293413173652695},{"x":1784772581997,"y":78.51901267511674},{"x":1784772586998,"y":69.66666666666667},{"x":1784772591996,"y":76.68670674682699},{"x":1784772596999,"y":78.69507323568575},{"x":1784772601996,"y":77.20588235294117},{"x":1784772606998,"y":61.270903010033436},{"x":1784772611997,"y":76.06666666666668},{"x":1784772616998,"y":70.02670226969292},{"x":1784772621997,"y":41.44385026737968},{"x":1784772626999,"y":59.093937375
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Post Run neurogenomics/rworkflows@master
AxiosError: Request failed with status code 403
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Post Run neurogenomics/rworkflows@master
[Workflow Telemetry] AxiosError
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Complete job
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/cache@v4, catchpoint/workflow-telemetry-action@v2. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
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Run neurogenomics/rworkflows@master
dependencies ‘BiocVersion’, ‘BiocStyle’ are not available
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Run neurogenomics/rworkflows@master
The following taps are not trusted:
aws/tap
Homebrew is currently ignoring formulae, casks and commands from these taps because tap trust is required.
Untap them with:
brew untap aws/tap
Trust specific formulae, casks and commands with:
brew trust --formula <user>/<tap>/<formula>
brew trust --cask <user>/<tap>/<cask>
brew trust --command <user>/<tap>/<command>
Whole-tap trust is broader and includes all current and future formulae,
casks and commands from the listed taps. Trust whole taps with:
brew trust aws/tap
To disable trust checks:
export HOMEBREW_NO_REQUIRE_TAP_TRUST=1
This is not recommended and will be removed in a later release.
For more information, see:
https://docs.brew.sh/Tap-Trust
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Run neurogenomics/rworkflows@master
imagemagick@6 has been deprecated because it is end of life and only receives security updates! It will be disabled on 2029-04-01.
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Run neurogenomics/rworkflows@master
The following taps are not trusted:
aws/tap
Homebrew is currently ignoring formulae, casks and commands from these taps because tap trust is required.
Untap them with:
brew untap aws/tap
Trust specific formulae, casks and commands with:
brew trust --formula <user>/<tap>/<formula>
brew trust --cask <user>/<tap>/<cask>
brew trust --command <user>/<tap>/<command>
Whole-tap trust is broader and includes all current and future formulae,
casks and commands from the listed taps. Trust whole taps with:
brew trust aws/tap
To disable trust checks:
export HOMEBREW_NO_REQUIRE_TAP_TRUST=1
This is not recommended and will be removed in a later release.
For more information, see:
https://docs.brew.sh/Tap-Trust
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