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Fix failing GHA check workflow due to new version of Deriv #688

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Merged
remlapmot merged 2 commits into from
Jul 28, 2026
Merged

Fix failing GHA check workflow due to new version of Deriv #688

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73d4145
Fix GHA build failure with Deriv 4.3.0
remlapmot Jul 28, 2026
4633f12
Amend > to | in vignette YAML header
remlapmot Jul 28, 2026
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2 changes: 1 addition & 1 deletion .github/workflows/check-full.yaml
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Original file line number Diff line number Diff line change
Expand Up @@ -73,7 +73,7 @@ jobs:
- uses: r-lib/actions/setup-r-dependencies@v2
with:
extra-packages: >
any::rcmdcheck, MendelianRandomization=?ignore-before-r=4.4.0, car=?ignore-before-r=4.3.2, Cairo=?ignore-before-r=4.3.0, meta=?ignore-before-r=4.4.0, mr.raps=?ignore-before-r=4.5.0
any::rcmdcheck, MendelianRandomization=?ignore-before-r=4.4.0, car=?ignore-before-r=4.5.0, Cairo=?ignore-before-r=4.3.0, meta=?ignore-before-r=4.4.0, mr.raps=?ignore-before-r=4.5.0
needs: check
upgrade: 'TRUE'

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2 changes: 1 addition & 1 deletion vignettes/exposure.Rmd
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Expand Up @@ -6,7 +6,7 @@ output:
toc: true
toc_depth: 2
bibliography: refs.bib
vignette: >
vignette: |
%\VignetteIndexEntry{Exposure data}
%\VignetteEngine{knitr::rmarkdown}
%\VignetteEncoding{UTF-8}
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2 changes: 1 addition & 1 deletion vignettes/gwas2020.Rmd
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@@ -1,7 +1,7 @@
---
title: "Major changes to the IEU GWAS resources for 2020"
output: rmarkdown::html_vignette
vignette: >
vignette: |
%\VignetteIndexEntry{Major changes to the IEU GWAS resources for 2020}
%\VignetteEngine{knitr::rmarkdown}
%\VignetteEncoding{UTF-8}
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2 changes: 1 addition & 1 deletion vignettes/harmonise.Rmd
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Expand Up @@ -6,7 +6,7 @@ output:
toc: true
toc_depth: 2
bibliography: refs.bib
vignette: >
vignette: |
%\VignetteIndexEntry{Harmonise data}
%\VignetteEngine{knitr::rmarkdown}
%\VignetteEncoding{UTF-8}
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2 changes: 1 addition & 1 deletion vignettes/introduction.Rmd
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Expand Up @@ -6,7 +6,7 @@ output:
toc: true
toc_depth: 2
bibliography: refs.bib
vignette: >
vignette: |
%\VignetteIndexEntry{Introduction}
%\VignetteEngine{knitr::rmarkdown}
%\VignetteEncoding{UTF-8}
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2 changes: 1 addition & 1 deletion vignettes/outcome.Rmd
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Expand Up @@ -6,7 +6,7 @@ output:
toc: true
toc_depth: 2
bibliography: refs.bib
vignette: >
vignette: |
%\VignetteIndexEntry{Outcome data}
%\VignetteEngine{knitr::rmarkdown}
%\VignetteEncoding{UTF-8}
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2 changes: 1 addition & 1 deletion vignettes/perform_mr.Rmd
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Expand Up @@ -6,7 +6,7 @@ output:
toc: true
toc_depth: 2
bibliography: refs.bib
vignette: >
vignette: |
%\VignetteIndexEntry{Perform MR}
%\VignetteEngine{knitr::rmarkdown}
%\VignetteEncoding{UTF-8}
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