R/Python Interoperability documentation - #225
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Co-authored-by: Michael Stadler <stadler.michael@gmail.com> Co-authored-by: Charlotte Soneson <charlottesoneson@gmail.com> Co-authored-by: Samuel Gunz <samuel@gunz.ch>
Use duckspatial instead of arrow for ShapeFrame and PointFrame
Co-authored-by: Michael Stadler <stadler.michael@gmail.com> Co-authored-by: Charlotte Soneson <charlottesoneson@gmail.com> Co-authored-by: Samuel Gunz <samuel@gunz.ch>
Implement query function for PointFrame
Co-authored-by: Michael Stadler <stadler.michael@gmail.com> Co-authored-by: Charlotte Soneson <charlottesoneson@gmail.com>
Co-authored-by: Michael Stadler <stadler.michael@gmail.com> Co-authored-by: Charlotte Soneson <charlottesoneson@gmail.com>
Co-authored-by: Michael Stadler <stadler.michael@gmail.com> Co-authored-by: Charlotte Soneson <charlottesoneson@gmail.com>
Co-authored-by: Michael Stadler <stadler.michael@gmail.com> Co-authored-by: Charlotte Soneson <charlottesoneson@gmail.com>
Co-authored-by: Michael Stadler <stadler.michael@gmail.com> Co-authored-by: Charlotte Soneson <charlottesoneson@gmail.com>
Co-authored-by: Michael Stadler <stadler.michael@gmail.com> Co-authored-by: Charlotte Soneson <charlottesoneson@gmail.com>
Co-authored-by: Michael Stadler <stadler.michael@gmail.com> Co-authored-by: Charlotte Soneson <charlottesoneson@gmail.com> Co-authored-by: Samuel Gunz <samuel@gunz.ch>
Use dedicated base R functions to simplify some code patterns
* use BiocGenerics::table * fix R CMD check note re: sf::st_point * v0.99.38
* revise validity to accept >2/3D * revise ome(ro) version retrieval * make use of new BiocGenerics * move EBImage to Suggests:, remove paws * minimal list of authors until further discussion
* use prototyped S4Vectors::SimpleList as slots * new path() method to retrieve on-disk file paths * more tests & validity * bump to v0.99.39
Artur-man
marked this pull request as draft
May 31, 2026 16:32
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Thanks for this effort, really important!! If it's not crazy long, how about a section in the main vignette? I think a separate doc will more easily be missed |
Collaborator
Author
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Absolutely, let me play with it to make it look better. When done, I would be happy with it going anywhere you see fit. |
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A separate vignette showcasing R/Python API comparison.