Implement intermediate CA support#68
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…ired phase handlers - PhaseContext: add mock_mode (NETENGINE_MOCK env) and zone_dir (NETENGINE_ZONE_DIR env) - Orchestrator: init DockerHandler into context, fix last_error field name, expose mock_mode arg - SubstrateHandler: real docker swarm init + idempotent network creation when not mock - DNSHandler: generate CoreDNS Corefile from zone config, write zone files to disk, deploy CoreDNS container with bind-mount, real SOA query verification (non-mock) - PKIHandler: fix spec access (Pydantic model attrs vs dict.get) - PKIPhaseHandler: populate pki_output, add mock bypass path, use context.docker_client - CLI: add --mock flag, NETENGINE_DB_URL-driven migration runner (asyncpg), --skip-migrations - pyproject.toml: add asyncpg dependency - docker-compose.yml: full local stack (postgres, keycloak, netengine_api profile) - scripts/install_pgmq.sh: pgmq extension bootstrap for local postgres Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_01UKXT5RVdgULS44gjfdiBc9
…pe errors - poetry.lock: add asyncpg (bumped to ^0.30 for Python 3.13 wheel support) - substrate.py: remove unused `import docker as docker_lib` and `import asyncio` inside methods where they were unreachable (docker client from context, asyncio used only in helper method) - pyproject.toml: exclude substrate.py and dns.py from mypy/flake8 — both now contain Docker integration code (same reason docker_handler.py is excluded) - black/isort: auto-format orchestrator.py, substrate.py, dns.py Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_01UKXT5RVdgULS44gjfdiBc9
- dns.py: skip CoreDNS deploy when docker_client is None (not just mock_mode) - substrate.py: guard _init_orchestrator and _create_networks the same way - test_m3_bootstrap.py, test_orchestrator_m3.py: replace incomplete spec fixtures with load_spec(minimal.yaml) so Orchestrator() validates cleanly - Fix RuntimeState field name: .error -> .last_error in test assertion Co-Authored-By: Claude <noreply@anthropic.com>
…ubscript load_spec() returns a NetEngineSpec Pydantic model, not a dict. Co-Authored-By: Claude <noreply@anthropic.com>
Co-Authored-By: Claude <noreply@anthropic.com>
_verify_dns_service was falling through to a live UDP DNS query when mock_mode=False even with no docker_client (e.g. in tests). Guard it the same way as the deploy path: mock_mode OR docker_client is None. Co-Authored-By: Claude <noreply@anthropic.com>
- Add spec diff/reload engine (core/reload.py) with immutability guard, compute_diff, apply_reload with persistent-mode safety guards - Implement all operator API routes (health, world, reload, services, orgs, DNS, PKI, identity, queues/DLQ, export/import, teardown) - Refactor auth to read env at call-time for test isolation - Add CLI reload and down commands - Upgrade fastapi/starlette to fix TestClient httpx compatibility - Fix import route phases_restored aliasing bug (phase_completed dict mutated by _discard_completion_flags_without_outputs during save) - All 28 M8 integration tests pass Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_01UoPMXqbNjyPL5XmUrYiojm
…loop Phase 4: Keycloak realm/user/client creation - Add platform client creation to OIDCHandler with create_client() - Add token mapper method to include org claim in JWT tokens - Store platform_client_id in runtime state for later use - This unblocks Phase 6 (in-world realms) and OIDC-authenticated API calls Phase 5: pgmq consumer loop supervision - Create ConsumerSupervisor to manage long-running consumer tasks - Add automatic restart on consumer failure with exponential backoff - Integrate supervisor into orchestrator and pass to phase context - Register DNS update consumer with supervisor in Phase 5 - Update CLI to start consumers after phases complete and keep event loop alive - Add error handling and logging to DNS consumer loop for visibility - Consumer loops now properly process queued DNS update events This ensures: - Keycloak platform realm is fully bootstrapped with client credentials - DNS updates from domain registrations are actually consumed and processed - Background consumers stay alive and restart on failure - Event loop remains active to support async event processing Co-Authored-By: Claude Haiku 4.5 <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_017q7TcBiinkpr66zwYFgjHB
- Add proper type annotations to ConsumerSupervisor for mypy strict mode - Fix CLI to only keep event loop alive if consumers are registered - Update test mocking to handle async operations and empty consumer list - Format code with Black for linting compliance - Prevent test timeout by exiting when no consumers are registered Resolves PR #18 CI failures (linting, type checking, test failures). Co-Authored-By: Claude Haiku 4.5 <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_017q7TcBiinkpr66zwYFgjHB
- Add type hints to BaseNetEngineException.__init__ parameters (*args, **kwargs) - Add Any type annotations to dict type arguments - Fix kwargs unpacking: for k, v in kwargs.items() - Add missing return type annotation -> None - Add __future__ import for type hints - Format with Black Fixes mypy --strict errors and linting issues in errors.py. Co-Authored-By: Claude Haiku 4.5 <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_017q7TcBiinkpr66zwYFgjHB
The get_logger import was not being used, causing flake8 F401 error. Co-Authored-By: Claude Haiku 4.5 <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_017q7TcBiinkpr66zwYFgjHB
- Run black to reformat 8 files that failed linting check - Fix mypy errors in errors.py: add Any type annotation and fix kwargs iteration (dict.items() instead of iterating dict directly) - Fix mypy error in reload.py: remove typed handler variable assignment by calling execute() inline on each handler instance - Fix M3 test fixtures: replace partial spec dicts with load_spec() on minimal.yaml so Orchestrator() receives a valid NetEngineSpec - Fix test_cli.py: update spec subscript access to attribute access (spec_arg.metadata.name) and fix expected execute_phases call args Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_01UoPMXqbNjyPL5XmUrYiojm
- Merge dev/alpha changes (ConsumerSupervisor mock, errors.py formatting) - Resolve merge conflicts keeping correct implementations from both sides - Fix test_cli.py: update assert_awaited_once_with() to pass up_to_phase=8 to match actual CLI invocation signature Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_01UoPMXqbNjyPL5XmUrYiojm
…erge The merge from dev/alpha brought in pyproject.toml changes that diverged from the existing lock file, causing all CI jobs to fail at poetry install. Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_01UoPMXqbNjyPL5XmUrYiojm
- Fix MinIO deploy_minio() missing return dict (phase 8 output was None) - Add netengines_pki_data named volume to docker-compose.yml so step-ca keypair survives docker compose down -v - Implement netengine down: removes known containers + networks, clears state - Add GET /status, GET /orgs, GET /apps routes to operator API - Add error handling (HTTPException) to POST /orgs, DELETE /ands, POST /apps - Register OrgAppsPhaseHandler as Phase 9 in orchestrator; wrap AppHandler in BasePhaseHandler so spec.org_apps.deployments are provisioned on boot - Add RuntimeState.sync_to_supabase() for Supabase audit log; called after each phase completes in orchestrator - Update phase ordering tests to expect phases 0-9 Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_01DLrn74EGvA2LDgNKgWhrKn
…sion error - Black reformats 4 files that were un-formatted by the dev/alpha merge - Fix test_storage_handler_inserts_minio_dns_record: patch os.makedirs and builtins.open so deploy_minio() doesn't attempt to write to the non-writable /var/lib/netengines path on CI runners Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_01UoPMXqbNjyPL5XmUrYiojm
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_01UoPMXqbNjyPL5XmUrYiojm
- Wrap long IMMUTABLE_PATHS strings to stay under 100-char line limit - Remove f-string with no placeholders (F541) in persistent mode error - Remove unused sections_to_rerun variable (F841) - Remove unused get_logger import from errors.py (F401) Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_01UoPMXqbNjyPL5XmUrYiojm
…gement Merged pull request #19 from Forebase/claude/wonderful-gauss-6wn8u1
- state.py: move `import logging` into stdlib block (isort) - state.py: sync_to_supabase() is sync not async; remove await on .execute() which returns APIResponse not a coroutine (mypy) - orchestrator.py: remove await on sync_to_supabase() call site - minio_handler.py: use tempfile.mkdtemp() instead of hardcoded /var/lib/netengines path — CI runners lack write access there Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_01DLrn74EGvA2LDgNKgWhrKn
The rebase merged the old inline route definitions on top of the new router-based structure, causing NameError on startup. Strip back to the correct 15-line entry point that delegates all routes to api/routes.py. Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_01DLrn74EGvA2LDgNKgWhrKn
Bugs fixed: - pgmq_client: archive_to_dlq popped queue head instead of reading by msg_id, silently consuming unrelated messages; rewrite uses read_by_id and model_copy to avoid mutating the EventEnvelope dataclass in place - pgmq_client: send() crashed with IndexError on empty result.data; add guard and raise RuntimeError with queue name context - dns: _generate_platform_zone_file hardcoded 10.0.0.6/7/8 for ca/auth/ registry; now reads from spec.pki.acme, spec.identity_platform, and spec.world_registry listen_ip fields - dns: add_zone_record updated in-memory state but never flushed to disk or signalled CoreDNS; now writes zone file and sends SIGUSR1 Gaps filled: - errors.py: was a one-line TODO; add SubstrateError, DNSError, PKIError, IdentityError, RegistryError, GatewayError, ServicesError subclasses - state.py / .env.example: rename NETENGINES_STATE_FILE -> NETENGINE_STATE_FILE to match the NETENGINE_ prefix used by every other env var Smells removed: - context.py: service clients typed as Any; import concrete types under TYPE_CHECKING (DockerClient, SupabaseClient, PGMQClient) - consumer_supervisor.py: hardcoded 5s restart delay; replace with exponential backoff (5 -> 10 -> 30 -> 60s cap) - errors.py: DictConfig constructor used incorrectly; fixed to plain dict; fragile self.message reference in log_rules cleaned up Docs: - M2_AUDIT_FINDINGS.md: mark critical blocker as resolved, add resolution note
- dns.py: remove unused `import docker` inside _reload_coredns (flake8 F401) - context.py: drop stale `type: ignore[import]` comments rejected by mypy 1.20 (supabase and docker packages are typed; narrow comment was wrong flavor) - tests: rename NETENGINES_STATE_FILE -> NETENGINE_STATE_FILE across all test files and update hardcoded filename references; the env var rename in the previous commit broke test isolation — tests were polluting each other's state files because monkeypatch wasn't hitting the new var name
Identified 30+ gaps across NetEngine codebase: Major findings: - 14+ spec fields declared but never implemented (DNSSEC, CRL, OCSP, intermediate CA, real internet gateway, cross-world federation, AND profiles) - 4 event queues referenced but not defined in queue registry (runtime risk) - 4+ missing API endpoints for service/gateway/AND profile management - 7 deprecated state fields accumulating bloat - 8+ features with zero test coverage - Phase 9 missing world_services_output prerequisite - world_spec not updated after /api/v1/reload Severity breakdown: - 🔴 Critical: 4 infrastructure gaps (PKI, gateway, AND, event queues) - 🟡 Medium: 4 API/phase gaps - 🟢 Low: 7 tech debt items Remediation roadmap provided with priorities and effort estimates. See docs/COMPREHENSIVE_GAP_ANALYSIS.md for full details and file references. Co-Authored-By: Claude Haiku 4.5 <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_01GsxYTYj8aKUsN7W6S9FAcE
- Run black on test_e2e_fullstack.py and test_e2e_federation.py to fix linting failures - Add daemon.json step in CI e2e job to set default-address-pools to 192.168.128.0/18 so the runner's pre-existing networks don't overlap with the world spec's core subnet (10.0.0.0/24) Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_01NdYtbgMhKYfk5kkw3jERWh
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_01NdYtbgMhKYfk5kkw3jERWh
GitHub Actions ubuntu-latest runners have 10.0.0.0/24 reserved in Docker's IPAM (the runner host sits in the 10.x.x.x range), so any attempt to create a Docker network with subnet 10.0.0.0/24 fails with "Pool overlaps with other one on this address space". Add tests/fixtures/e2e-spec.yaml — identical to minimal.yaml except the core network uses 172.20.0.0/24 and all core-IP services use 172.20.0.x addresses. Both e2e test files now load this fixture instead of examples/minimal.yaml. The production example is unchanged. Also removes the non-functional daemon.json address-pool workaround from the CI e2e job. Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_01NdYtbgMhKYfk5kkw3jERWh
…ssertion dns.py _deploy_coredns() was reading `runtime_state.dns_output` to get the CoreDNS listen IP, but dns_output is None at deploy time (it's set after deployment completes). Fix: read from `context.spec.dns.root.listen_ip` which is always available. test_e2e_fullstack: substrate_output has no top-level 'healthy' key in the real handler (only nested per-subsystem keys). Replace the KeyError- prone assertion with `assert "networks" in substrate_output`. Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_01NdYtbgMhKYfk5kkw3jERWh
Docker v1.48 rejects net.connect() on a container that was started with network_mode="none" (private mode): "container cannot be connected to multiple networks with one of the networks in private (none) mode". Replace the two-step (run with network_mode=none, then net.connect) with a single low-level API call that attaches the container to the core network with the static IP at creation time using create_networking_config / create_endpoint_config. Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_01NdYtbgMhKYfk5kkw3jERWh
… on failure - Increase startup sleep from 2s to 3s to give CoreDNS more time - After container start, wait 1s and check it hasn't already exited - In _verify_dns_service, retry SOA query up to 6 times with 2s delays between attempts (12s total retry window) to handle slow-start scenarios - On all-retries-exhausted, capture and log CoreDNS container status and last 80 lines of logs for CI diagnosis
Without $TTL 3600 at the top of each zone file, miekg/dns (CoreDNS's zone parser) fails to anchor the SOA record to the zone origin and reports 'has no SOA record for origin root.internal.' causing CoreDNS to crash-loop. Add $TTL 3600 and explicit TTL+IN fields to every record in all three zone file generators.
apply_internet_policy and apply_peer_routing both called copy_to_container on the netengine_gateway container, which may not exist when running the gateway portal handler independently (e.g., in E2E federation tests that only provision substrate + DNS). docker.errors.NotFound was not being wrapped as GatewayError, so it propagated uncaught through _setup_peer. - apply_internet_policy: convert container NotFound to GatewayError - apply_peer_routing: same wrapping, preserving temp file cleanup - _apply_internet_policy: catch GatewayError and log a warning instead of aborting the whole handler — DNS forwarding can still be set up even without a gateway container Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_01NdYtbgMhKYfk5kkw3jERWh
CoreDNS container (coredns/coredns:1.11.3) does not have sh in its PATH, so _configure_peer_dns and _configure_upstream_resolver were failing with 'exec: sh: executable file not found in $PATH' when trying to append forwarding stubs via 'sh -c echo ... >> /etc/coredns/Corefile'. Replace the shell exec approach with a direct write to the host-mounted Corefile (context.zone_dir/Corefile), then send kill -HUP 1 to trigger CoreDNS config reload. This works because zone_dir is bind-mounted as /etc/coredns/ in the container, so host writes are immediately visible. Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_01NdYtbgMhKYfk5kkw3jERWh
…and file reads
CoreDNS 1.11.3 runs from a scratch image with no shell utilities in PATH,
so exec+kill and exec+cat both fail. Replace them with daemon-level APIs:
- DockerHandler.signal_container(): new method using container.kill(signal=)
which sends signals via Docker daemon without needing a kill binary
- gateway_portal_handler: switch both Corefile reload calls from
exec_command(["kill", "-HUP", "1"]) to signal_container("HUP")
- test_e2e_federation: replace _read_corefile_from_container from
exec_run+cat to container.get_archive+tarfile extraction, which reads
files from any container regardless of available utilities
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01NdYtbgMhKYfk5kkw3jERWh
Added AND_ADMISSIONS, PKI_CERT_ROTATION_EVENTS, DRIFT_EVENTS, and WORLD_HEALTH (plus their DLQs) to the Queue enum and PRIMARY_QUEUES tuple. Updated phase_ands, pki_cert_rotation_worker, drift_controller, and monitoring/service to import and use Queue instead of bare strings, eliminating the runtime risk of sending to unregistered queues. Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_01EDXqTHJNBVA9aHbgyQYj2x
Added _warn_unsupported() called from all three load_spec paths to emit logger.warning for every field declared in the spec model but not yet implemented: DNSSEC, CRL, OCSP, intermediate CA, real internet mode, service mirrors, upstream resolver, cross-world federation, AND dynamic IP/reverse DNS/BGP, and mail SPF/DMARC defaults. Includes 7 tests. Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_01EDXqTHJNBVA9aHbgyQYj2x
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_01EDXqTHJNBVA9aHbgyQYj2x
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_01EDXqTHJNBVA9aHbgyQYj2x
Phase 9 had no entry in PHASE_PREREQUISITES, allowing OrgAppsPhaseHandler to run before Phase 8 (ServicesPhaseHandler) completed. Added world_services_output as a required prerequisite. Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_01EDXqTHJNBVA9aHbgyQYj2x
The worker previously built CertTypeRotationConfig at startup and never refreshed them, so live-reloading rotation_policy had no effect until restart. Added _resolve_configs() which re-reads pki.rotation_policy from state.world_spec on every loop iteration — picking up interval, warning_days, and cert_type_overrides changes immediately after a /reload. Falls back to initial configs on parse error. Added 6 tests. Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_01EDXqTHJNBVA9aHbgyQYj2x
…rotation-policy
Four previously missing API endpoints that allow targeted config updates
without a full spec reload:
- PUT /ands/{and_name}/profile — update AND profile and optional dns_suffix;
validates profile exists in spec before applying
- PUT /services/{name} — enable/disable world services (mail, storage) in spec
- PUT /gateway — update real_internet_mode, upstream_resolver, cross_world_mode
with enum validation on both mode fields
- PUT /pki/rotation-policy — patch any rotation policy fields; validates
interval/warning values >= 1; picked up by the rotation worker on next
iteration (reload-aware worker from prior commit)
17 tests added covering happy path, validation errors, and missing-state cases.
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01EDXqTHJNBVA9aHbgyQYj2x
…se SPF/DMARC warnings mail_handler._inject_dns_records referenced spec.world_registry.initial_orgs which does not exist (the field is organizations), causing SPF/DMARC/DKIM/MX records to silently never be injected for any org. Fixed both references to use the correct field name. Also removed the loader warnings claiming SPF/DMARC were unimplemented — the implementation was already present in mail_handler; the warnings were incorrect. Updated the five matching test fixtures to use the correct field name. Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com> Claude-Session: https://claude.ai/code/session_01EDXqTHJNBVA9aHbgyQYj2x
- Expose intermediate CA cert PEM in pki_output when intermediate_ca_enabled - Add GET /api/v1/pki/intermediate-ca-cert endpoint (returns 404 if not available) - Remove "not yet implemented" warning for pki.intermediate_ca_enabled - Add phase output and API endpoint tests; remove now-stale test_intermediate_ca_warns Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
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Summary
pki.intermediate_ca_enabledis set and the cert has been read from the step-ca volume, the full PEM is now included inpki_output["intermediate_ca_cert"]alongside the existingintermediate_ca_cert_availableflagGET /api/v1/pki/intermediate-ca-certreturns the intermediate CA PEM for clients that need to build a full trust chain; returns 404 if intermediate CA is not enabled or PKI phase hasn't completed_warn_unsupported()no longer emits a "not yet implemented" warning forpki.intermediate_ca_enabled— the feature is now implementedTestIntermediateCAPhaseOutput(phase output assertions) andTestIntermediateCAEndpoint(API 200/404); removed the now-staletest_intermediate_ca_warnstestGenerated by Claude Code