All issues

Epic 1: skill to query the phs anchor — dbGaP FHIR record + publication(s) for a phsid

#324

· NoopDog opened

on Aug 14, 2026

Roadmap: study-anchored external metadata (phsid → dbGaP record + methods paper → justify metadata picks)

#323

· NoopDog opened

on Aug 14, 2026

Add the conditional (status-aware) self-consistency rules deferred by #314

#322

· NoopDog opened

on Aug 13, 2026

Turn the self-consistency linter into a CI hard gate

#321

· NoopDog opened

on Aug 13, 2026

MetaDisco prep for AnVIL tech call demo

#320

· NoopDog opened

on Aug 11, 2026

Import: Terra workspaces (data tables + attributes) — metadata staged but not wrangled to TDR

#313

· NoopDog opened

on Jul 31, 2026

Resolve companion/auxiliary files (checksums, indexes) — propagate from parent or tag by type, genomic dims not_applicable

#312

· NoopDog opened

on Jul 30, 2026

Add classification rules for the unhandled data-format tail (~16K files: bigWig, GFF3, indexes, chains, h5ad, PAF…)

#311

· NoopDog opened

on Jul 30, 2026

Import: HPRC / HPRC_R2 — library_strategy -> FASTQ modality/assay (requirements & design)

#310

· NoopDog opened

on Jul 30, 2026

Schema: add a biosample / anatomical-site (tissue) element (design note)

#309

· NoopDog opened

on Jul 30, 2026

classify_images.py still emits a 'confidence' field — migrate off it (#56 confidence removal)

#308

· NoopDog opened

on Jul 30, 2026

Import: GTEx public (histology) — requirements & design

#307

· NoopDog opened

on Jul 30, 2026