GitHub - ChaissonLab/RepeatMasking: A snakefile to run repeatmasker on genomes in a scatter/gather approach. · GitHub

Name		Name	Last commit message	Last commit date
T2TLib		T2TLib
AppendOutFile.py		AppendOutFile.py
CombineFasta.py		CombineFasta.py
CombineMask.cpp		CombineMask.cpp
ConcatFiles.py		ConcatFiles.py
CountRep.cpp		CountRep.cpp
DivideFasta.py		DivideFasta.py
HardMask.cpp		HardMask.cpp
MakeRMSKJson.py		MakeRMSKJson.py
Makefile		Makefile
MaskBed.cpp		MaskBed.cpp
MaskedToBed.cpp		MaskedToBed.cpp
RepeatMaskGenome.epp.snakefile		RepeatMaskGenome.epp.snakefile
WriteDivideFastaOutput.py		WriteDivideFastaOutput.py
repeat_masker.out.header		repeat_masker.out.header
t2t_repeat_mask.json		t2t_repeat_mask.json

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A snakefile to run repeatmasker on genomes in a scatter/gather approach.

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