Issues

• Installation issues

  COMBINE-lab/minnow#30 · Filter by author MarcelloMalpighi opened on Apr 1, 2025

• installation:minnow requires g++ 5.2 or greater

  COMBINE-lab/minnow#29 · Filter by author mechealeth opened on Apr 9, 2024

• compiling problem

  COMBINE-lab/minnow#28 · Filter by author imerelli opened on Mar 14, 2023
  1

• What is the true_cell_names.txt file for?

  COMBINE-lab/minnow#27 · Filter by author ColeWunderlich opened on Feb 2, 2023

• Simulated 3'tagged single cell dataset

  COMBINE-lab/minnow#26 · Filter by author franzake opened on Nov 4, 2022

• Can't seem to install minnow

  COMBINE-lab/minnow#25 · Filter by author joelmeili opened on Oct 4, 2022
  3

• Simulated reads seem to not be compatible with Cell Ranger 6

  COMBINE-lab/minnow#22 · Filter by author hoyu310 opened on May 6, 2021
  3

• Controlling whether there's multi-mapping in the simulated reads

  COMBINE-lab/minnow#21 · Filter by author hoyu310 opened on Apr 30, 2021

• Which fasta should be provided to minnow estimate?

  COMBINE-lab/minnow#17 · Filter by author ColeWunderlich opened on Jan 28, 2021

• Is Alevin mode still supported? -- Simulating from Alevin or CellRanger run

  COMBINE-lab/minnow#16 · Filter by author ColeWunderlich opened on Jan 19, 2021

• Applicability to 10X 5' Data?

  COMBINE-lab/minnow#13 · Filter by author cohenp05 opened on Aug 18, 2020
  1

• New conda version

  COMBINE-lab/minnow#5 · Filter by author hiraksarkar opened on Aug 27, 2019
  5