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Sub-SBML

Create SBML Models Using Simple Commands, Interconnection of SBML Models, and Interaction Modeling in Biomolecular Circuits

Sub-SBML is a Python based toolbox to create, edit, combine, and model interactions among multiple SBML models. Sub-SBML works with a “subsystem” architecture of modeling where a single SBML model can be contained within a subsystem. Three major functionalities are developed in Sub-SBML that take advantage of this subsystem framework of modeling – creating subsystems, combining multiple subsystems, and modeling interactions such as transport of molecules and input-output relationships among multiple subsystems.

Table Of Contents

Installation

Usage

Citing and Feedback

Citing and Feedback

If you have feedback on the software, please feel free to contact Prof. Richard M. Murray at Caltech.