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Ayushmania2002/README.md

Computational genomics animation

Plant Growth Animation

💫 About Me:

I am a Senior Research Fellow at ICAR–Indian Agricultural Research Institute (ICAR-IARI), New Delhi, India with a strong interdisciplinary focus on integrating data science and computational genomics into plant science and agriculture.

My research interests lie in genome-wide regulatory analysis, cis-regulatory element discovery, and the development of scalable bioinformatics pipelines for large plant genomes. I have designed and implemented CYC-GS, a computational pipeline for cis-element identification across whole plant genomes, enabling high-throughput regulatory landscape analysis.

I actively work with Python, C (Ubuntu Linux) and R for data analysis, pipeline development, and visualization, and I am particularly interested in applying machine learning and statistical approaches to solve complex problems in plant genomics and crop improvement.

Research interests:

Plant genomics and regulatory genomics

Cis-regulatory element discovery

Bioinformatics pipeline development

Molecular docking

Protein–protein and protein–DNA interactions

Data science applications in agriculture

Computational research animation



Plant science visualization


🧰 Technical Skills

Programming: Python,C(Linux Ubuntu), R

Genomics & data analysis workflows
Reproducible research and open science


🌐 Socials

LinkedIn Profile X (Twitter) Profile Email

💻 Tech Stack

Python R C Linux Ubuntu Anaconda Matplotlib NumPy Pandas PyTorch scikit-learn Streamlit

📊 GitHub Stats




✍️ Random Dev Quote


🔝 Top Contributed Repo


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  1. Ayushmania2002 Ayushmania2002 Public

    3 1

  2. Cis-GS Cis-GS Public

    Whole Genome Cis-regulatory element scanner and Characterisation based on Gene Expression

    Jupyter Notebook 1

  3. boltzyml boltzyml Public

    Preprocessing file generator (v1) and hosted Boltz-2 API builder/submitter (v2.0) — binary, ternary, or N-body protein-ligand-DNA-RNA binding prediction.

    HTML 11

  4. ayushman-portfolio ayushman-portfolio Public

    Check out my webpage for ongoing research updates. Let's connect if you're a plant biologist with innovative ideas on bridging structural biology, plant science, genomics software development and b…

    HTML