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Sourmash consumr is not installing in newer R versions

Status: Open.

#79 In Arcadia-Science/sourmashconsumr;

· hugofmonteiro opened on Nov 21, 2025

Importing tax_annotated files after using newer sourmash version

Status: Open.

#78 In Arcadia-Science/sourmashconsumr;

· hugofmonteiro opened on Nov 21, 2025

Importing distance.cmp into R

Status: Open.

#77 In Arcadia-Science/sourmashconsumr;

· UniAlberta opened on Oct 5, 2024

enable taxonomy plotting with LIN taxonomic framework?

Status: Open.

#72 In Arcadia-Science/sourmashconsumr;

· bluegenes opened on Mar 15, 2023

n_unique_kmers doesn't exist

Status: Open.

#71 In Arcadia-Science/sourmashconsumr;

· bluegenes opened on Mar 13, 2023

Alpha diversity estimation

Status: Open.

#70 In Arcadia-Science/sourmashconsumr;

· gabridinosauro opened on Mar 7, 2023

order sankey plot by most frequently occurring level instead of alphabetical?

Status: Open.

#63 In Arcadia-Science/sourmashconsumr;

· taylorreiter opened on Jan 10, 2023

add tidyr::drop_na() to sankey plot function to avoid errors/warnings and inaccurate plots

Status: Open.

#62 In Arcadia-Science/sourmashconsumr;

· taylorreiter opened on Jan 10, 2023

allow users to choose to name from filename or name from query name when plotting things that have multiple samples

enhancementNew feature or requestNew feature or request

Status: Open.

#54 In Arcadia-Science/sourmashconsumr;

· taylorreiter opened on Jan 3, 2023

add a new visualization for sourmash taxonomy annotate that's like the plot_gather_classified() plot

enhancementNew feature or requestNew feature or request

Status: Open.

#52 In Arcadia-Science/sourmashconsumr;

· taylorreiter opened on Jan 3, 2023

Coloring strain plots and why I decided not to implement it for now

Status: Open.

#51 In Arcadia-Science/sourmashconsumr;

· taylorreiter opened on Jan 3, 2023

for plot_taxonomy_annotate_ts_alluvial(), add a show_tax argument that allows the user to control which taxa are given alluvial ribbons

enhancementNew feature or requestNew feature or request

Status: Open.

#40 In Arcadia-Science/sourmashconsumr;

· taylorreiter opened on Nov 16, 2022