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Pull requests: AMICI-dev/AMICI

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Pull requests list

Chain PEtab v2 experiment periods natively in the JAX simulator
#3198 opened Jul 4, 2026 by FFroehlich Member • Draft
7
Avoid JAX recompilation from fresh steady_state_event closures
#3197 opened Jul 4, 2026 by FFroehlich Member Loading…
3 tasks done
3
Fix JAX PEtab backend: discontinuities, PEtab v1 import, event assignments
#3196 opened Jul 4, 2026 by FFroehlich Member Loading…
3 tasks done
6
Fix NameError in JAX _known_discs for w-dependent explicit triggers
#3195 opened Jul 4, 2026 by FFroehlich Member Loading…
4 tasks done
4
Update SciML src and tests to use libpetab linting
#3194 opened Jun 30, 2026 by BSnelling Collaborator • Draft
1
Update references
#3188 opened Jun 18, 2026 by dweindl Member • Draft
@dweindl
1
Fix flaky test_benchmark_gradient / Weber_BMC2015
#3174 opened Apr 29, 2026 by dweindl Member • Draft
@dweindl
1
Extend support for extracting common subexpressions
#3170 opened Apr 27, 2026 by dweindl Member • Draft
1
@dweindl
1
Feature/add conda recipe
#3075 opened Nov 24, 2025 by kaiserls • Draft
2
Mask root functions
#2862 opened Jun 30, 2025 by dweindl Member • Draft
@dweindl
1
Avoid events for smooth piecewise codex
#2840 opened Jun 26, 2025 by FFroehlich Member • Draft
1
3
Add gradient checks for SBML test suite
#2093 opened May 16, 2023 by dilpath Member • Draft
@dilpath
4
Truncated normal and censored normal noise distributions
#1925 opened Jan 11, 2023 by plakrisenko Member • Draft
@plakrisenko
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