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name: CI
on:
push:
branches:
- "main"
pull_request:
branches:
- "main"
workflow_dispatch: # allows you to trigger manually
concurrency:
group: ${{ github.workflow }}-${{ github.ref }}
cancel-in-progress: true
env:
FORCE_COLOR: 3
permissions: {}
jobs:
detect-ci-trigger:
name: detect ci trigger
runs-on: ubuntu-slim
if: |
github.repository == 'pydata/xarray'
&& (github.event_name == 'push' || github.event_name == 'pull_request')
&& !contains(github.event.pull_request.labels.*.name, 'skip-ci')
outputs:
triggered: ${{ steps.detect-trigger.outputs.trigger-found }}
steps:
- uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
with:
fetch-depth: 2
persist-credentials: false
- uses: xarray-contrib/ci-trigger@10cd2bfec3484946a4058a421ddf9cfad101e715 # v1.2.1
id: detect-trigger
with:
keyword: "[skip-ci]"
cache-pixi-lock:
needs: detect-ci-trigger
if: needs.detect-ci-trigger.outputs.triggered == 'false'
runs-on: ubuntu-latest
outputs:
cache-key: ${{ steps.pixi-lock.outputs.cache-key }}
steps:
- uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
with:
persist-credentials: false
- uses: xarray-contrib/pixi-lock/create-and-cache@1fab4c17af8243f6ca1321bc941cf2325f46c05d # v0.1.1
id: pixi-lock
- uses: actions/upload-artifact@cf430e030ddbb5b0abf93d22962f4752f3646cd9 # v7.0.2
with:
name: pixi-lock
path: pixi.lock
test:
name: "${{ matrix.os }} | ${{ matrix.pixi-env }}${{ matrix.pytest-addopts && format(' ({0})', matrix.pytest-addopts) || '' }}"
runs-on: ${{ matrix.os }}
needs: cache-pixi-lock
# The slowest jobs take ~20 minutes; a hung test should not burn the 6h default.
timeout-minutes: 60
defaults:
run:
shell: bash -l {0}
strategy:
fail-fast: false
matrix:
os: ["ubuntu-latest", "macos-latest", "windows-latest"]
# Bookend python versions
pixi-env: ["test-py312", "test-py314"]
pytest-addopts: [""]
include:
# Minimum python version:
- pixi-env: "test-py312-bare-minimum"
os: ubuntu-latest
- pixi-env: "test-py312-bare-min-and-scipy"
os: ubuntu-latest
- pixi-env: "test-py312-min-versions"
os: ubuntu-latest
# Latest python version:
- pixi-env: "test-py314-no-numba"
os: ubuntu-latest
- pixi-env: "test-py314-no-dask"
os: ubuntu-latest
- pixi-env: "test-py314"
pytest-addopts: "flaky"
os: ubuntu-latest
# The mypy tests must be executed using only 1 process in order to guarantee
# predictable mypy output messages for comparison to expectations.
- pixi-env: "test-py312-with-typing"
pytest-addopts: "mypy"
numprocesses: 1
os: ubuntu-latest
- pixi-env: "test-py314-with-typing"
numprocesses: 1
os: ubuntu-latest
environment:
name: codecov
deployment: false
steps:
- uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1
with:
fetch-depth: 0 # Fetch all history for all branches and tags.
persist-credentials: false
- name: Restore cached pixi lockfile
uses: xarray-contrib/pixi-lock/restore@1fab4c17af8243f6ca1321bc941cf2325f46c05d # v0.1.1
with:
cache-key: ${{ needs.cache-pixi-lock.outputs.cache-key }}
- uses: prefix-dev/setup-pixi@9dabb60412d3d2d967a8d682f7ce01317af40514 # v0.11.0
with:
pixi-version: ${{ needs.cache-pixi-lock.outputs.pixi-version }}
cache: true
environments: ${{ matrix.pixi-env }}
cache-write: ${{ github.event_name == 'push' && github.ref_name == 'main' }}
- name: Set environment variables
run: |
echo "TODAY=$(date +'%Y-%m-%d')" >> $GITHUB_ENV
echo "PYTHON_VERSION=$(pixi run -e ${{ matrix.pixi-env }} -- python --version | cut -d' ' -f2 | cut -d. -f1,2)" >> $GITHUB_ENV
if [[ "${{ matrix.pytest-addopts }}" != "" ]] ;
then
if [[ "${{ matrix.pytest-addopts }}" == "flaky" ]] ;
then
# The thread timeout method also kills tests stuck in C code or deadlocked
# threads, which the default signal method cannot interrupt.
echo "PYTEST_ADDOPTS=-m 'flaky or network' --run-flaky --run-network-tests --timeout-method=thread -W default" >> $GITHUB_ENV
elif [[ "${{ matrix.pytest-addopts }}" == "mypy" ]] ;
then
echo "PYTEST_ADDOPTS=-n 1 -m 'mypy' --run-mypy -W default" >> $GITHUB_ENV
fi
if [[ "${{ matrix.pixi-env }}" == "min-all-deps" ]] ;
then
# Don't raise on warnings
echo "PYTEST_ADDOPTS=-W default" >> $GITHUB_ENV
fi
fi
# We only want to install this on one run, because otherwise we'll have
# duplicate annotations.
- name: Install error reporter
if: |
matrix.os == 'ubuntu-latest' && matrix.pixi-env == 'test'
run: |
pixi add --pypi pytest-github-actions-annotate-failures
- name: Version info
run: |
pixi run -e ${{ matrix.pixi-env }} -- python xarray/util/print_versions.py
- name: Import xarray
run: |
pixi run -e ${{ matrix.pixi-env }} -- python -c "import xarray"
# caches are immutable, so use a unique key per job and restore the latest cache
# https://github.com/actions/cache/blob/main/tips-and-workarounds.md#update-a-cache
- name: Restore cached hypothesis directory
uses: actions/cache/restore@55cc8345863c7cc4c66a329aec7e433d2d1c52a9 # v6.1.0
with:
path: .hypothesis/
key: cache-hypothesis-${{ runner.os }}-${{ github.run_id }}-${{ github.run_attempt }}-${{ strategy.job-index }}
restore-keys: |
cache-hypothesis-${{ runner.os }}-
cache-hypothesis-
enableCrossOsArchive: true
- name: Run tests
id: tests
run: |
pixi run -e ${{ matrix.pixi-env }} -- python -m pytest -n ${{ matrix.numprocesses || 4 }} \
--timeout 180 \
--cov=xarray \
--cov-report=xml \
--junitxml=pytest.xml
# explicitly save the cache so it gets updated, also do this even if the tests fail
- name: Save cached hypothesis directory
if: always() && steps.tests.outcome != 'skipped'
uses: actions/cache/save@55cc8345863c7cc4c66a329aec7e433d2d1c52a9 # v6.1.0
with:
path: .hypothesis/
key: cache-hypothesis-${{ runner.os }}-${{ github.run_id }}-${{ github.run_attempt }}-${{ strategy.job-index }}
enableCrossOsArchive: true
- name: Upload test results
if: always()
uses: actions/upload-artifact@cf430e030ddbb5b0abf93d22962f4752f3646cd9 # v7.0.2
with:
name: Test results for OS ${{ runner.os }} pixi-env ${{ matrix.pixi-env }} pytest-addopts ${{ matrix.pytest-addopts }}
path: pytest.xml
- name: Upload code coverage to Codecov
uses: codecov/codecov-action@303a32d7a59b442fa8d48b6a1cc6825c09c847a5 # v7.1.1
env:
CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}
with:
files: ./coverage.xml
flags: unittests
env_vars: RUNNER_OS,PYTHON_VERSION
name: codecov-umbrella
fail_ci_if_error: false
event_file:
name: "Event File"
runs-on: ubuntu-slim
if: github.repository == 'pydata/xarray'
steps:
- name: Upload
uses: actions/upload-artifact@cf430e030ddbb5b0abf93d22962f4752f3646cd9 # v7.0.2
with:
name: Event File
path: ${{ github.event_path }}