From 33802a8098e8a47ebb42805a42dfc2d2eee24e4e Mon Sep 17 00:00:00 2001
From: Aidan Hilt <ahilt@uchicago.edu>
Date: Tue, 18 Jul 2023 12:21:35 -0400
Subject: [PATCH 1/4] Moving dictionary CI from Travis to GitHub Actions

---
 .github/dictionary_push.yaml | 13 +++++++++++++
 .travis.yml                  | 20 --------------------
 2 files changed, 13 insertions(+), 20 deletions(-)
 create mode 100644 .github/dictionary_push.yaml
 delete mode 100644 .travis.yml

diff --git a/.github/dictionary_push.yaml b/.github/dictionary_push.yaml
new file mode 100644
index 0000000..0623119
--- /dev/null
+++ b/.github/dictionary_push.yaml
@@ -0,0 +1,13 @@
+name: Build Microbiome dictionary
+
+on: push
+
+jobs:
+  dictionary:
+    name: Build and Deploy Dictionary
+    uses: uc-cdis/.github/.github/workflows/dictionary_push.yaml
+    with:
+      DIRECTORY: "microbiome_datadictionary"
+    secrets:
+      AWS_ACCESS_KEY_ID: ${{ secrets.ECR_AWS_ACCESS_KEY_ID }}
+      AWS_SECRET_ACCESS_KEY: ${{ secrets.ECR_AWS_SECRET_ACCESS_KEY }}
diff --git a/.travis.yml b/.travis.yml
deleted file mode 100644
index cef4d32..0000000
--- a/.travis.yml
+++ /dev/null
@@ -1,20 +0,0 @@
-language: python
-python:
-- '3.6'
-before_script:
-- yes | python setup.py install
-- git clone https://github.com/uc-cdis/dictionaryutils; cd dictionaryutils
-script:
-- "./run_tests.sh"
-deploy:
-  provider: s3
-  access_key_id: AKIAZRNPHKJIPRRTEJUI
-  secret_access_key:
-    secure: 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
-  bucket: dictionary-artifacts
-  local-dir: artifacts
-  upload-dir: microbiome_datadictionary/$TRAVIS_BRANCH
-  skip_cleanup: true
-  on:
-    repo: uc-cdis/Microbiome_datadictionary
-    all_branches: true

From 259f17920cce32a648e64f473256bf5bc1168157 Mon Sep 17 00:00:00 2001
From: Aidan Hilt <ahilt@uchicago.edu>
Date: Tue, 18 Jul 2023 17:16:25 -0400
Subject: [PATCH 2/4] Adding version tag, updating secret name

---
 .github/dictionary_push.yaml | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

diff --git a/.github/dictionary_push.yaml b/.github/dictionary_push.yaml
index 0623119..a917e5a 100644
--- a/.github/dictionary_push.yaml
+++ b/.github/dictionary_push.yaml
@@ -5,9 +5,9 @@ on: push
 jobs:
   dictionary:
     name: Build and Deploy Dictionary
-    uses: uc-cdis/.github/.github/workflows/dictionary_push.yaml
+    uses: uc-cdis/.github/.github/workflows/dictionary_push.yaml@master
     with:
       DIRECTORY: "microbiome_datadictionary"
     secrets:
-      AWS_ACCESS_KEY_ID: ${{ secrets.ECR_AWS_ACCESS_KEY_ID }}
-      AWS_SECRET_ACCESS_KEY: ${{ secrets.ECR_AWS_SECRET_ACCESS_KEY }}
+      AWS_ACCESS_KEY_ID: ${{ secrets.DICT_AWS_ACCESS_KEY_ID }}
+      AWS_SECRET_ACCESS_KEY: ${{ secrets.DICT_AWS_SECRET_ACCESS_KEY }}

From e7448d1126089ef30d140dd850dfe5f7862dbe19 Mon Sep 17 00:00:00 2001
From: Aidan Hilt <ahilt@uchicago.edu>
Date: Tue, 18 Jul 2023 17:23:54 -0400
Subject: [PATCH 3/4] Moving dictionary action to .github/workflows

---
 .github/{dictionary_push.yaml => workflows/dictioanry_push.yaml} | 0
 1 file changed, 0 insertions(+), 0 deletions(-)
 rename .github/{dictionary_push.yaml => workflows/dictioanry_push.yaml} (100%)

diff --git a/.github/dictionary_push.yaml b/.github/workflows/dictioanry_push.yaml
similarity index 100%
rename from .github/dictionary_push.yaml
rename to .github/workflows/dictioanry_push.yaml

From 4158238161cc9814bdf289a369666828cc97b6ec Mon Sep 17 00:00:00 2001
From: Aidan Hilt <ahilt@uchicago.edu>
Date: Tue, 18 Jul 2023 17:26:04 -0400
Subject: [PATCH 4/4] Fixing typo in the name of the dictionary file

---
 .github/workflows/{dictioanry_push.yaml => dictionary_push.yaml} | 0
 1 file changed, 0 insertions(+), 0 deletions(-)
 rename .github/workflows/{dictioanry_push.yaml => dictionary_push.yaml} (100%)

diff --git a/.github/workflows/dictioanry_push.yaml b/.github/workflows/dictionary_push.yaml
similarity index 100%
rename from .github/workflows/dictioanry_push.yaml
rename to .github/workflows/dictionary_push.yaml