When using singularity and clustermq and launching clustermq jobs from the Job Launcher, the jobs are not properly run and the pre-processed template listed in the .out file, e.g.
YXJncz0tYyxjZCB+L3NvbC1lbmctc2luZ3VsYXJpdHkvc2luZ3VsYXJpdHkvY2x1c3Rlcm1xL2V4YW1w
bGUgJiYgUiAtLXNsYXZlIC0tbm8tc2F2ZSAtLW5vLXJlc3RvcmUgLWYgfi9zb2wtZW5nLXNpbmd1bGFy
aXR5L3Npbmd1bGFyaXR5L2NsdXN0ZXJtcS9leGFtcGxlL2Z1bmN0aW9uLlI7ZXhlPS9iaW4vYmFzaDt0
YWdzPXJzdHVkaW8tci1zY3JpcHQtam9iOn4vc29sLWVuZy1zaW5ndWxhcml0eS9zaW5ndWxhcml0eS9j
bHVzdGVybXEvZXhhbXBsZS9mdW5jdGlvbi5SO2Nvbj1Db250YWluZXIlZXItc2Vzc2lvbi1jb21wbGV0
ZS51YnVudHUyMDA0LmltZzs=
* The library is already synchronized with the lockfile.
[1] "#!/bin/sh\n#SBATCH --job-name=cmq9120\n#SBATCH --output=cmq9120-%a.log # yo
u can add .%a for array index\n#SBATCH --error=cmq9120-%a.log\n#SBATCH --mem-per
-cpu=1024\n#SBATCH --array=1-4\n#SBATCH --cpus-per-task=1\n#SBATCH --singularity
-container=r-session-complete.ubuntu2004.img\n###SBATCH --singularity-bind=/var/
spool/slurmd\n\nulimit -v $(( 1024 * 1024 ))\nCMQ_AUTH=kcruv R --no-save --no-re
store -e 'clustermq:::worker(\"tcp://all-dy-rstudio-1:9120\")'\n"
a517ba9a76e048d9907316b37bad4c1a
When using singularity and clustermq and launching clustermq jobs from the Job Launcher, the jobs are not properly run and the pre-processed template listed in the .out file, e.g.