vcfSummary.pm can not parse my vcf file properly. Command: perl qc3.pl -m v -i test.vcf -o my-out-dir. It always gives a lot of errors like "Use of uninitialized value ... ...", then causes R functions crash (non-numeric values passed to numeric variables ...). Please let me know if you need my test.vcf to do debug, thanks!
vcfSummary.pm can not parse my vcf file properly. Command: perl qc3.pl -m v -i test.vcf -o my-out-dir. It always gives a lot of errors like "Use of uninitialized value ... ...", then causes R functions crash (non-numeric values passed to numeric variables ...). Please let me know if you need my test.vcf to do debug, thanks!