multiweb/NAMESPACE at master · skortsch/multiweb · GitHub

1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
# Generated by roxygen2: do not edit by hand

export(calcIncoherence)
export(calcModularitySWnessZScore)
export(calcTopologicalIndices)
export(calc_QSS)
export(calc_QSS_extinction_dif)
export(calc_incoherence)
export(calc_modularity)
export(calc_modularity_swness_zscore)
export(calc_quantitative_connectance)
export(calc_swness_zscore)
export(calc_topological_indices)
export(calc_topological_roles)
export(calc_weighted_topological_indices)
export(classify_topological_roles)
export(curveBall)
export(curve_ball)
export(fromGLVadjToIgraph)
export(fromIgraphToMgraph)
export(generateERbasal)
export(generate_er_basal)
export(plotTrophLevel)
export(plot_troph_level)
export(readMultiplex)
export(readNetwork)
export(toGLVadjMat)
import(igraph)
importFrom(NetIndices,TrophInd)
importFrom(RColorBrewer,brewer.pal)
importFrom(doFuture,registerDoFuture)
importFrom(dplyr,"%>%")
importFrom(dplyr,bind_rows)
importFrom(dplyr,dense_rank)
importFrom(dplyr,group_by)
importFrom(dplyr,inner_join)
importFrom(dplyr,mutate)
importFrom(dplyr,summarise_all)
importFrom(foreach,"%dopar%")
importFrom(foreach,foreach)
importFrom(future,multiprocess)
importFrom(future,multisession)
importFrom(future,sequential)
importFrom(future.apply,future_lapply)
importFrom(igraph,E)
importFrom(igraph,V)
importFrom(igraph,average.path.length)
importFrom(igraph,cluster_spinglass)
importFrom(igraph,degree)
importFrom(igraph,ecount)
importFrom(igraph,get.adjacency)
importFrom(igraph,graph_from_adjacency_matrix)
importFrom(igraph,graph_from_data_frame)
importFrom(igraph,transitivity)
importFrom(igraph,vcount)