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The repository has been upgraded from Python 2 to Python 3 now. The code has now been published on Code Ocean at this link as well.

This Code Ocean compute capsule will allow you to reproduce the results published by the author on your local machine1. Follow the instructions below, or consult our knowledge base for more information. Don't hesitate to reach out via live chat or email if you have any questions.

1 You may need access to additional hardware and/or software licenses.

Prerequisites

Instructions

The computational environment (Docker image)

This capsule has been published and its environment has been archived and made available on Code Ocean's Docker registry: registry.codeocean.com/published/c8caea82-8be7-4ec9-a4ce-fa5723b90420:v1

Running the capsule to reproduce the results

In your terminal, navigate to the folder where you've extracted the capsule and execute the following command, adjusting parameters as needed:

docker run --rm \
  --workdir /code \
  --volume "$PWD/data":/data \
  --volume "$PWD/code":/code \
  --volume "$PWD/results":/results \
  registry.codeocean.com/published/c8caea82-8be7-4ec9-a4ce-fa5723b90420:v1 ./run