diff --git a/README.md b/README.md index 1e6670b..7e33aed 100644 --- a/README.md +++ b/README.md @@ -9,14 +9,15 @@ **QFeaturesGUI** is a collection of Shiny applications that provide graphical -user interfaces for MS-based proteomics data analysis using the Bioconductor +user interfaces for MS-based proteomics data analysis using the +[R for Mass Spectrometry](https://www.rformassspectrometry.org/)/[Bioconductor](https://bioconductor.org/) ecosystem. It supports both **bulk** and **single-cell proteomics (SCP)** workflows and builds on the [`QFeatures`](https://www.bioconductor.org/packages/release/bioc/html/QFeatures.html) and [`scp`](https://bioconductor.org/packages/release/bioc/html/scp.html) packages. Rather than a single application, QFeaturesGUI is composed of -multiple apps, each dedicated to a specific step of the proteomics data +multiple apps, each dedicated to specific steps of the proteomics data analysis workflow. @@ -73,6 +74,7 @@ and projects for MS-based proteomics and single-cell data analysis: - [`msqrob2`](https://www.bioconductor.org/packages/release/bioc/html/msqrob2.html) Robust statistical inference for quantitative LC-MS proteomics + - [`RforMassSpectrometry`](https://www.rformassspectrometry.org/) A collection of R packages for the analysis and interpretation of mass spectrometry data. @@ -88,9 +90,10 @@ and projects for MS-based proteomics and single-cell data analysis: ## Contributing -Contributions to `QFeaturesGUI` are welcome. This includes bug reports, +Contributions to `QFeaturesGUI` are welcome. These include bug reports, feature requests, and suggestions for new applications or improvements to -existing ones. +existing ones. Contributors agree to abide by the terms of the project +[Code of Conduct](https://rformassspectrometry.github.io/RforMassSpectrometry/articles/RforMassSpectrometry.html#code-of-conduct). Issues and enhancement requests can be submitted via the [GitHub issue tracker](https://github.com/rformassspectrometry/QFeaturesGUI/issues).