Downloading GitHub repo quantling/ndl2@HEAD
✔ checking for file ‘/tmp/RtmpFbrjVv/remotes1f67548ee37a1/quantling-ndl2-5f26ad0/DESCRIPTION’ ...
─ preparing ‘ndl2’:
✔ checking DESCRIPTION meta-information ...
─ cleaning src
─ checking for LF line-endings in source and make files and shell scripts
─ checking for empty or unneeded directories
─ looking to see if a ‘data/datalist’ file should be added
─ building ‘ndl2_0.1.1.tar.gz’
Installing package into ‘/home/tino/R/x86_64-pc-linux-gnu-library/4.2’
(as ‘lib’ is unspecified)
* installing *source* package ‘ndl2’ ...
** using staged installation
** libs
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I'/home/tino/R/x86_64-pc-linux-gnu-library/4.2/Rcpp/include' -fopenmp -DUSING_RCPP=1 -Wall -fpic -g -O2 -ffile-prefix-map=/home/jranke/git/r-backports/bullseye/r-base-4.2.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c common/helper.cpp -o common/helper.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I'/home/tino/R/x86_64-pc-linux-gnu-library/4.2/Rcpp/include' -fopenmp -DUSING_RCPP=1 -Wall -fpic -g -O2 -ffile-prefix-map=/home/jranke/git/r-backports/bullseye/r-base-4.2.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c common/serialization.cpp -o common/serialization.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I'/home/tino/R/x86_64-pc-linux-gnu-library/4.2/Rcpp/include' -fopenmp -DUSING_RCPP=1 -Wall -fpic -g -O2 -ffile-prefix-map=/home/jranke/git/r-backports/bullseye/r-base-4.2.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c common/Exception.cpp -o common/Exception.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I'/home/tino/R/x86_64-pc-linux-gnu-library/4.2/Rcpp/include' -fopenmp -DUSING_RCPP=1 -Wall -fpic -g -O2 -ffile-prefix-map=/home/jranke/git/r-backports/bullseye/r-base-4.2.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c common/view_events.cpp -o common/view_events.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I'/home/tino/R/x86_64-pc-linux-gnu-library/4.2/Rcpp/include' -fopenmp -DUSING_RCPP=1 -Wall -fpic -g -O2 -ffile-prefix-map=/home/jranke/git/r-backports/bullseye/r-base-4.2.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c danks.cpp -o danks.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I'/home/tino/R/x86_64-pc-linux-gnu-library/4.2/Rcpp/include' -fopenmp -DUSING_RCPP=1 -Wall -fpic -g -O2 -ffile-prefix-map=/home/jranke/git/r-backports/bullseye/r-base-4.2.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c learning/rescorla_wagner.cpp -o learning/rescorla_wagner.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I'/home/tino/R/x86_64-pc-linux-gnu-library/4.2/Rcpp/include' -fopenmp -DUSING_RCPP=1 -Wall -fpic -g -O2 -ffile-prefix-map=/home/jranke/git/r-backports/bullseye/r-base-4.2.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c learning/file_management.cpp -o learning/file_management.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I'/home/tino/R/x86_64-pc-linux-gnu-library/4.2/Rcpp/include' -fopenmp -DUSING_RCPP=1 -Wall -fpic -g -O2 -ffile-prefix-map=/home/jranke/git/r-backports/bullseye/r-base-4.2.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c learning/util.cpp -o learning/util.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I'/home/tino/R/x86_64-pc-linux-gnu-library/4.2/Rcpp/include' -fopenmp -DUSING_RCPP=1 -Wall -fpic -g -O2 -ffile-prefix-map=/home/jranke/git/r-backports/bullseye/r-base-4.2.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c learning/matrix_io.cpp -o learning/matrix_io.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I'/home/tino/R/x86_64-pc-linux-gnu-library/4.2/Rcpp/include' -fopenmp -DUSING_RCPP=1 -Wall -fpic -g -O2 -ffile-prefix-map=/home/jranke/git/r-backports/bullseye/r-base-4.2.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c learning/events_manager.cpp -o learning/events_manager.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I'/home/tino/R/x86_64-pc-linux-gnu-library/4.2/Rcpp/include' -fopenmp -DUSING_RCPP=1 -Wall -fpic -g -O2 -ffile-prefix-map=/home/jranke/git/r-backports/bullseye/r-base-4.2.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c learning/r_wrapper.cpp -o learning/r_wrapper.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I'/home/tino/R/x86_64-pc-linux-gnu-library/4.2/Rcpp/include' -fopenmp -DUSING_RCPP=1 -Wall -fpic -g -O2 -ffile-prefix-map=/home/jranke/git/r-backports/bullseye/r-base-4.2.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c preprocessing/ndlpreproc.cpp -o preprocessing/ndlpreproc.o
preprocessing/ndlpreproc.cpp: In function ‘std::string getFormattedTime(tm*)’:
preprocessing/ndlpreproc.cpp:1539:31: warning: ‘%02d’ directive output may be truncated writing between 2 and 11 bytes into a region of size between 8 and 15 [-Wformat-truncation=]
1539 | snprintf(buffer, 20, "%4d-%02d-%02d %02d:%02d:%02d", 1900+ptm->tm_year,
| ^~~~
preprocessing/ndlpreproc.cpp:1539:26: note: directive argument in the range [-2147483647, 2147483647]
1539 | snprintf(buffer, 20, "%4d-%02d-%02d %02d:%02d:%02d", 1900+ptm->tm_year,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:867,
from /usr/include/c++/10/cstdio:42,
from preprocessing/ndlpreproc.cpp:10:
/usr/include/x86_64-linux-gnu/bits/stdio2.h:67:35: note: ‘__builtin___snprintf_chk’ output between 20 and 72 bytes into a destination of size 20
67 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
| ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
68 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I'/home/tino/R/x86_64-pc-linux-gnu-library/4.2/Rcpp/include' -fopenmp -DUSING_RCPP=1 -Wall -fpic -g -O2 -ffile-prefix-map=/home/jranke/git/r-backports/bullseye/r-base-4.2.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c preprocessing/ndlOutBuffer.cpp -o preprocessing/ndlOutBuffer.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I'/home/tino/R/x86_64-pc-linux-gnu-library/4.2/Rcpp/include' -fopenmp -DUSING_RCPP=1 -Wall -fpic -g -O2 -ffile-prefix-map=/home/jranke/git/r-backports/bullseye/r-base-4.2.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c view_events_wrapper.cpp -o view_events_wrapper.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I'/home/tino/R/x86_64-pc-linux-gnu-library/4.2/Rcpp/include' -fopenmp -DUSING_RCPP=1 -Wall -fpic -g -O2 -ffile-prefix-map=/home/jranke/git/r-backports/bullseye/r-base-4.2.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c preprocessing_wrapper.cpp -o preprocessing_wrapper.o
make: *** No rule to make target 'RcppExports.o', needed by 'ndl2.so'. Stop.
ERROR: compilation failed for package ‘ndl2’
* removing ‘/home/tino/R/x86_64-pc-linux-gnu-library/4.2/ndl2’
Warning message:
In i.p(...) :
installation of package ‘/tmp/RtmpFbrjVv/file1f675655196fa/ndl2_0.1.1.tar.gz’ had non-zero exit status
For some reason it is not possible to install
ndl2with `devtools:install_github('quantling/ndl2').After installing devtools and the dependencies of
ndl2with:I still get an error message after running:
The error message is: