One idea to attach extra annotation information for matches and offtargets would be to have guidescan enumerate take in an optional BED/GTF file and add selected/all columns from it to the output BED file.
samtools/bedtools may well already do this kind of merge, so it may not be technically needed (except for offtargets which will be tricky to handle).
One idea to attach extra annotation information for matches and offtargets would be to have
guidescan enumeratetake in an optionalBED/GTFfile and add selected/all columns from it to the outputBEDfile.samtools/bedtoolsmay well already do this kind of merge, so it may not be technically needed (except for offtargets which will be tricky to handle).