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Overview

v1

Config files

configs-base.yml: base experiments (cell nuclei)
configs-edge.yml: edge experiments (cell border)

Data prep

prep/prepare.py

create_raw(...) ==> /data/raw/flame/proc/raw

NOTE: these experiments failed due to poor annotations

v2

configs-v00.yml: cell nuclei + border (v00 dataset)
configs-v01.yml: cell nuclei + border (v01 dataset)

Data prep

prep/prepare.py

create_v00(...) ==> /data/raw/flame/proc/v00
create_v01(...) ==> /data/raw/flame/proc/v01 (NEWEST DATASET)