swathLib/.gitignore at master · noatgnu/swathLib · GitHub

1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
# Byte-compiled / optimized / DLL files
__pycache__/
*.py[cod]
*$py.class

# C extensions
*.so

# Distribution / packaging
.Python
build/
develop-eggs/
dist/
downloads/
eggs/
.eggs/
lib/
lib64/
parts/
sdist/
var/
wheels/
*.egg-info/
.installed.cfg
*.egg
MANIFEST

# PyInstaller
#  Usually these files are written by a python script from a template
#  before PyInstaller builds the exe, so as to inject date/other infos into it.
*.manifest
*.spec

# Installer logs
pip-log.txt
pip-delete-this-directory.txt

# Unit test / coverage reports
htmlcov/
.tox/
.coverage
.coverage.*
.cache
nosetests.xml
coverage.xml
*.cover
.hypothesis/
.pytest_cache/

# Translations
*.mo
*.pot

# Django stuff:
*.log
local_settings.py
db.sqlite3

# Flask stuff:
instance/
.webassets-cache

# Scrapy stuff:
.scrapy

# Sphinx documentation
docs/_build/

# PyBuilder
target/

# Jupyter Notebook
.ipynb_checkpoints

# pyenv
.python-version

# celery beat schedule file
celerybeat-schedule

# SageMath parsed files
*.sage.py

# Environments
.env
.venv
env/
venv/
ENV/
env.bak/
venv.bak/

# Spyder project settings
.spyderproject
.spyproject

# Rope project settings
.ropeproject

# mkdocs documentation
/site

# mypy
.mypy_cache/
db/helper.py
db/create.py
.idea/workspace.xml
.idea/vcs.xml
.idea/swathLib.iml
.idea/other.xml
.idea/modules.xml
.idea/misc.xml
.idea/inspectionProfiles/Project_Default.xml
.idea/dataSources/9ca8aefb-6084-4386-a553-7a172d5dc5b3/storage_v2/_src_/database/biosql.xsM2rQ/schema/public.abK9xQ.zip
.idea/dataSources/9ca8aefb-6084-4386-a553-7a172d5dc5b3/storage_v2/_src_/database/biosql.xsM2rQ/schema/public.abK9xQ.meta
.idea/dataSources/9ca8aefb-6084-4386-a553-7a172d5dc5b3/storage_v2/_src_/database/biosql.xsM2rQ.meta
.idea/dataSources/9ca8aefb-6084-4386-a553-7a172d5dc5b3.xml
.idea/dataSources.xml
.idea/dataSources.local.xml
main.py
main2.py
main3.py
mod.txt
mod2.txt
seq.txt
seq2.txt
static_mod_dict.json
swath/helper.py
SWATH_Windows.txt
test.fasta
test.json
test2.fasta
test2.json
test3.json
test4.json
test5.fasta.txt
test_lib.txt
test_out.txt
test_out2.txt
test_out4.txt
test_out6.txt
test_out7.txt
variable_mod_dict.json
windows.txt
test.txt
GAS1N40GS.txt_library_oxoall_allRT_10T2min75p100processed - Ions.normalized.txt
GAS1N40GS.txt_library_oxoall_allRT_10T2min75p100processed - Ions.rep_avg.txt
GAS1N40GS.txt_library_oxoall_allRT_10T2min75p100processed - Ions.txt
oxoniome_normalization.py
test2.csv
new_test.py

# compiled output
/dist
/tmp
/out-tsc
/app-builds
/release
main.js
src/**/*.js
*.js.map

# dependencies
/node_modules

# IDEs and editors
/.idea
.project
.classpath
.c9/
*.launch
.settings/
*.sublime-workspace

# IDE - VSCode
.vscode/*
!.vscode/settings.json
!.vscode/tasks.json
!.vscode/launch.json
!.vscode/extensions.json

# misc
/.sass-cache
/connect.lock
/coverage
/libpeerconnection.log
npm-debug.log
testem.log
/typings
package-lock.json

# e2e
/e2e/*.js
!/e2e/protractor.conf.js
/e2e/*.map

# System Files
.DS_Store
Thumbs.db

/backselector